Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC098848.2-201ENST00000588023 330 ntBASIC2.51□□□□□ -2.01
NEDD8-MDP1E9PL57 MIR15A-201ENST00000607334 83 ntBASIC2.51□□□□□ -2.01
NEDD8-MDP1E9PL57 AC136475.10-201ENST00000620253 385 ntBASIC2.51□□□□□ -2.01
NEDD8-MDP1E9PL57 AC002064.3-201ENST00000623448 346 ntBASIC2.51□□□□□ -2.01
NEDD8-MDP1E9PL57 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 Y_RNA.194-201ENST00000363985 102 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 SNORA25.6-201ENST00000364121 118 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 SNORD21-201ENST00000383953 95 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 RNU1-73P-201ENST00000383971 164 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 RNU6-641P-201ENST00000384006 107 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 SNORA70B-201ENST00000384210 135 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 MIR1-2-201ENST00000384961 85 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AL031779.1-201ENST00000415663 330 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 BPY2DP-201ENST00000422208 265 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 HMGN2P30-201ENST00000423237 256 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC009414.1-201ENST00000427200 443 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 GPR143P-201ENST00000434155 205 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AP000705.1-201ENST00000454567 350 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 RPS27AP10-201ENST00000496103 208 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC116562.3-201ENST00000506136 177 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 MTCO3P7-201ENST00000510008 774 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC108078.2-201ENST00000510750 236 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC009902.1-201ENST00000519351 183 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 MTCYBP20-201ENST00000524239 1129 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC068587.5-201ENST00000528506 175 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AL391840.1-201ENST00000571144 367 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 MTND1P15-201ENST00000579262 949 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC103987.3-201ENST00000582071 292 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC008521.1-201ENST00000587471 187 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC010620.2-201ENST00000600135 313 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 Z99129.1-201ENST00000612510 255 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 AC110079.1-202ENST00000635213 138 ntBASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
NEDD8-MDP1E9PL57 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 Y_RNA.367-201ENST00000365544 101 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RNU6-190P-201ENST00000384154 102 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 Y_RNA.582-201ENST00000391023 95 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 SNORA3.2-201ENST00000408221 125 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RNU2-25P-201ENST00000411041 191 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 GTF2IP20-201ENST00000431663 360 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC079781.2-201ENST00000446424 169 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC027673.1-201ENST00000456245 405 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RPL37P6-201ENST00000460682 294 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RPS27P26-201ENST00000494583 239 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RBBP4P6-201ENST00000508098 202 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC114786.4-201ENST00000508771 728 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC091133.4-201ENST00000511142 308 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RAC1P5-201ENST00000512182 576 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 MTND3P5-201ENST00000512798 333 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RN7SKP298-201ENST00000515950 94 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 SNORD27.1-201ENST00000516319 72 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RNU6-405P-201ENST00000516637 110 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 RNU6-410P-201ENST00000517006 107 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC087683.1-201ENST00000591187 441 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AL022154.1-201ENST00000604698 785 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC138649.3-201ENST00000622154 254 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 AC008669.1-201ENST00000565823 2178 ntBASIC2.49□□□□□ -2.01
NEDD8-MDP1E9PL57 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NEDD8-MDP1E9PL57 AC006020.1-201ENST00000420179 1854 ntBASIC2.48□□□□□ -2.01
NEDD8-MDP1E9PL57 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NEDD8-MDP1E9PL57 U8.2-201ENST00000363156 134 ntBASIC2.48□□□□□ -2.01
NEDD8-MDP1E9PL57 Y_RNA.318-201ENST00000365131 97 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms