Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL031667.3-201ENST00000620124 655 ntBASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.09□□□□□ -2.24
COL6A6A6NMZ7 TPTE2P4-201ENST00000258589 1605 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL391994.1-201ENST00000254724 282 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 RNU6-637P-201ENST00000384050 107 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL139421.1-201ENST00000423010 169 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL354692.1-201ENST00000423044 315 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC008850.1-201ENST00000427546 362 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC079780.1-201ENST00000428259 207 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 DUXAP8-207ENST00000456786 622 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 RNU6-420P-201ENST00000458780 107 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 RNA5SP233-201ENST00000459153 113 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 HAR1A.1-201ENST00000459583 118 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 RPS20P20-201ENST00000460498 340 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL049714.1-201ENST00000466686 347 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 RNU6-528P-201ENST00000516926 100 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 RNA5SP337-201ENST00000517007 109 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC091163.3-201ENST00000518269 1144 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL391261.3-201ENST00000557194 520 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL669831.4-202ENST00000590817 238 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC011451.2-201ENST00000604303 598 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL450336.1-201ENST00000605180 586 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC123912.5-201ENST00000605470 343 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL020996.3-201ENST00000606617 222 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC007349.4-201ENST00000608114 532 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC072039.2-201ENST00000608883 439 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL449363.1-201ENST00000617815 186 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC126544.2-201ENST00000625174 749 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 RNU4-91P-201ENST00000364778 135 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 RNU6-1207P-201ENST00000384343 107 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 MIR514A1-201ENST00000385133 98 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL049545.1-201ENST00000401856 572 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 MICF-203ENST00000432679 129 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC118469.1-201ENST00000442943 488 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 PTENP1-201ENST00000447117 1215 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL136380.1-201ENST00000447970 162 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 ANKRD26P4-201ENST00000455755 950 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 TMEM251P1-201ENST00000503717 318 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 MTATP6P9-201ENST00000515039 680 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 SNORA31.22-201ENST00000517204 135 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AP003461.1-201ENST00000528866 78 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL391001.1-201ENST00000602747 715 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC024933.1-201ENST00000608472 348 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC009974.1-201ENST00000608881 455 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC023158.2-201ENST00000614876 543 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC021755.4-201ENST00000616620 456 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AL031601.2-202ENST00000622650 282 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 AC010487.4-201ENST00000637027 61 ntBASIC1.08□□□□□ -2.24
COL6A6A6NMZ7 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 RNU6-28P-201ENST00000362378 107 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 Y_RNA.465-201ENST00000384293 102 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 MIR558-201ENST00000384920 94 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 C1DP1-201ENST00000426049 402 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC084290.1-201ENST00000434995 374 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 MTND2P32-201ENST00000521584 1038 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC022861.1-201ENST00000522981 663 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 CASP1P1-201ENST00000526345 212 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AL592221.1-201ENST00000605266 382 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC025594.3-201ENST00000613068 790 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC109809.1-201ENST00000619665 545 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC002550.2-201ENST00000621246 394 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 AL359851.1-201ENST00000569460 4997 ntBASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL6A6A6NMZ7 MTND5P10-201ENST00000603719 1809 ntBASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
COL6A6A6NMZ7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms