Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 MIR3167-201ENST00000579623 85 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC090616.3-201ENST00000582184 217 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC005771.1-201ENST00000585581 349 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC110760.3-201ENST00000598794 467 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 Z99497.2-201ENST00000603634 310 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC068276.1-201ENST00000605793 379 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC022893.3-201ENST00000607665 437 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.15-201ENST00000611544 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.16-201ENST00000613119 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.12-201ENST00000613778 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.20-201ENST00000613956 192 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.9-201ENST00000615427 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.11-201ENST00000616345 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.2-201ENST00000616535 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.3-201ENST00000617785 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.19-201ENST00000618602 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 RNU2-1-201ENST00000618664 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.6-201ENST00000619225 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.5-201ENST00000619465 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 U2.10-201ENST00000620268 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC110491.1-201ENST00000562191 2010 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AL137003.2-201ENST00000606924 2538 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6-960P-201ENST00000364056 120 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 SET-203ENST00000372688 801 ntTSL 2 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 SNORA75B-201ENST00000384053 137 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6-190P-201ENST00000384154 102 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 RPS3AP36-201ENST00000398190 775 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 MRPL42P2-201ENST00000403169 426 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 GSTA9P-201ENST00000406231 611 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 MIR1289-2-201ENST00000408360 111 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 RN7SKP142-201ENST00000411236 328 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 HMGN2P35-201ENST00000412164 270 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 RPL26P27-201ENST00000414397 437 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL353729.1-201ENST00000425044 720 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 HMGN2P3-201ENST00000433603 273 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 HMGN2P5-201ENST00000436882 273 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 GAPDHP17-201ENST00000449858 1001 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 RPL39P36-201ENST00000490784 156 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC105252.1-201ENST00000503089 286 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC098591.2-201ENST00000510152 315 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC010486.3-201ENST00000511602 785 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 SCARNA17.1-201ENST00000516211 143 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 SCARNA17.2-201ENST00000516334 143 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 RNA5SP402-201ENST00000517148 110 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC024619.4-201ENST00000580924 316 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC104763.2-201ENST00000604179 382 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AC073114.1-201ENST00000612027 490 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 SCARNA17.4-201ENST00000614296 143 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 AL512643.1-201ENST00000635735 524 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 MIR3974-201ENST00000637126 96 ntBASIC2.24□□□□□ -2.05
SMIM28A0A1B0GU29 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 VTRNA1-1-201ENST00000363120 99 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 Z98749.2-208ENST00000381646 500 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6-658P-201ENST00000384606 106 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 MIR558-201ENST00000384920 94 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AL513475.1-201ENST00000406602 315 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AL139156.1-201ENST00000412785 841 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 NDUFS5P4-201ENST00000412983 318 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 OR51A5P-201ENST00000415429 942 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC114491.1-201ENST00000416095 246 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC090960.1-201ENST00000421072 306 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 RPS24P1-201ENST00000438550 371 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 RPS15AP7-201ENST00000439294 405 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 AC027673.1-201ENST00000456245 405 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 SNRPFP4-201ENST00000456366 242 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 SNORD42A-201ENST00000459584 64 ntBASIC2.23□□□□□ -2.05
SMIM28A0A1B0GU29 RPL37P6-201ENST00000460682 294 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms