Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LOC102724428A0A0B4J2F2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.96□□□□□ -1.62
LOC102724428A0A0B4J2F2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LOC102724428A0A0B4J2F2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.96□□□□□ -1.62
LOC102724428A0A0B4J2F2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LOC102724428A0A0B4J2F2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LOC102724428A0A0B4J2F2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 Y_RNA.352-201ENST00000365439 102 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 MIR218-2-201ENST00000385006 110 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 AL603910.2-201ENST00000407268 136 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 MIR1251-201ENST00000408552 70 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 AP000275.1-201ENST00000411943 390 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 SDAD1P3-201ENST00000427380 333 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 RNU1-86P-201ENST00000516108 154 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 RNU4-71P-201ENST00000516258 113 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 RNU1-107P-201ENST00000516617 154 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC008694.2-201ENST00000517591 306 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 RPL21P7-201ENST00000557463 483 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC005951.2-201ENST00000576282 495 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC034102.8-201ENST00000615146 484 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 Z73965.1-201ENST00000623412 2297 ntBASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
LOC102724428A0A0B4J2F2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 Y_RNA.458-201ENST00000384240 102 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 MIR199A2-201ENST00000385289 110 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 MIR1271-201ENST00000408537 86 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC092573.2-201ENST00000434546 243 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AL138752.1-201ENST00000452964 351 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 SUMO2P6-201ENST00000505273 288 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 RN7SKP234-201ENST00000517173 224 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC022695.1-201ENST00000522089 237 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 DEFB108E-201ENST00000524692 240 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC233702.9-201ENST00000581528 203 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC006557.5-201ENST00000603126 811 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 RMST_4.1-201ENST00000616886 107 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 Z99571.1-201ENST00000636677 394 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 AL450472.1-202ENST00000637286 180 ntBASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LOC102724428A0A0B4J2F2 MTND5P9-201ENST00000503854 1755 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 Y_RNA.54-201ENST00000362766 105 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 RNU6-662P-201ENST00000384253 104 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 MIR521-1-201ENST00000384902 87 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 SNORA3C-201ENST00000408792 125 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 Z92545.1-201ENST00000411782 234 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 ATP5A1P2-201ENST00000412323 255 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 AL096701.2-201ENST00000416920 238 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 USP9YP7-201ENST00000436723 430 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 CYCSP35-201ENST00000451978 304 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 USP9YP32-201ENST00000452432 430 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC022493.1-201ENST00000492984 337 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 APOOP4-201ENST00000513530 597 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 MIR892C-201ENST00000516410 77 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC100770.1-201ENST00000532310 322 ntBASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LOC102724428A0A0B4J2F2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 Y_RNA.27-201ENST00000362540 103 ntBASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 snoU2_19.2-201ENST00000363024 80 ntBASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 NDUFB4P4-201ENST00000404822 243 ntBASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 RNA5SP494-201ENST00000410653 129 ntBASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 EI24P1-201ENST00000416584 867 ntBASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 AL592045.1-201ENST00000429867 352 ntBASIC4.92□□□□□ -1.62
LOC102724428A0A0B4J2F2 AC073587.1-201ENST00000447093 876 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms