Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MIR6515-201ENST00000619843 57 ntBASIC0.88□□□□□ -2.27
TRAV17A0A0B4J275 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV17A0A0B4J275 AL512506.2-201ENST00000624472 458 ntBASIC0.88□□□□□ -2.27
TRAV17A0A0B4J275 Z75746.1-201ENST00000440243 2080 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 DBF4P1-201ENST00000412976 1892 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 SNORD14B-201ENST00000364533 90 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 Y_RNA.354-201ENST00000365448 111 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 Y_RNA.466-201ENST00000384294 113 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 MIR613-201ENST00000385248 95 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AL591034.2-201ENST00000402839 359 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 RPL26P27-201ENST00000414397 437 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 RPL21P90-201ENST00000415692 466 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC092634.6-201ENST00000418558 192 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC097463.2-201ENST00000421074 142 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC019178.2-201ENST00000423595 505 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AL161651.1-201ENST00000440882 223 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 MTCO1P53-201ENST00000441633 699 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC079448.1-201ENST00000449377 373 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC019176.1-201ENST00000518519 225 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AP004247.1-201ENST00000531556 1289 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC090502.2-201ENST00000549267 280 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC012414.2-201ENST00000559474 187 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC090079.2-201ENST00000575289 768 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 BNIP3P24-201ENST00000593398 557 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AL050343.2-201ENST00000607338 280 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC092953.2-201ENST00000608000 699 ntBASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV17A0A0B4J275 TEX21P-201ENST00000447107 1476 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 SNORD115-48-201ENST00000364764 76 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 SNORD51.1-201ENST00000365405 77 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 MIR513A1-201ENST00000385138 129 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 RNU1-78P-201ENST00000391248 165 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 AL451054.2-201ENST00000420896 202 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 MRPL35P3-201ENST00000421557 364 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 KATNBL1P6-201ENST00000453433 915 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 RPL22P13-201ENST00000493291 347 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 PSMA3P-201ENST00000555485 635 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 NIFKP8-201ENST00000560500 874 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 AL357094.1-201ENST00000603845 844 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 AL355802.4-201ENST00000607635 548 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 DUSP12P1-201ENST00000612874 516 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 AL596245.1-201ENST00000618994 362 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV17A0A0B4J275 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 Y_RNA.112-201ENST00000363250 102 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 RNU1-23P-201ENST00000363361 144 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 SNORA62.1-201ENST00000364287 154 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 Y_RNA.548-201ENST00000384656 105 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 RNU6-796P-201ENST00000391086 107 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 RNU2-48P-201ENST00000410694 191 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 MTND4P24-201ENST00000424002 397 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 TOMM22P2-201ENST00000430735 237 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 TPTE2P1-204ENST00000435256 593 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 COPS8P3-201ENST00000526024 482 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AC079598.5-201ENST00000547460 117 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AC004805.2-201ENST00000605382 482 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AL109620.1-201ENST00000618738 1197 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AC006213.5-201ENST00000619673 288 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 AL159972.1-201ENST00000625150 448 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 U6.101-201ENST00000637707 76 ntBASIC0.85□□□□□ -2.27
TRAV17A0A0B4J275 MIR29C-201ENST00000385231 88 ntBASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 AC127391.1-201ENST00000411737 98 ntBASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 MTCYBP32-201ENST00000427945 1084 ntBASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 AL354941.1-201ENST00000438600 464 ntBASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 AL590365.1-201ENST00000450788 243 ntBASIC0.84□□□□□ -2.27
TRAV17A0A0B4J275 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms