Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AP006587.4-201ENST00000526053 529 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AP000873.5-201ENST00000533906 236 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 MIR4299-201ENST00000577899 72 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 MIR3945-201ENST00000581853 98 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AL031274.2-201ENST00000599419 203 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 BNIP3P27-201ENST00000599991 412 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AC034229.4-201ENST00000607861 441 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AC009974.1-201ENST00000608881 455 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AC009318.2-201ENST00000610917 651 ntBASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HHLA3Q9XRX5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 RNA5SP240-201ENST00000365355 128 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 SNORA25B-201ENST00000365507 128 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 RNU6-413P-201ENST00000384115 107 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 RNU6-997P-201ENST00000384725 107 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AC119751.3-201ENST00000399720 670 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 MIR1294-201ENST00000408503 142 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AL353621.1-201ENST00000418219 243 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AL592045.1-201ENST00000429867 352 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AL645568.3-201ENST00000433683 316 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AL353706.1-201ENST00000436728 494 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AC003989.2-201ENST00000440224 169 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 RN7SL429P-201ENST00000479090 223 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 RN7SL489P-201ENST00000486185 223 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AC108729.1-201ENST00000487812 947 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 RN7SL327P-201ENST00000488659 223 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AC055855.1-201ENST00000489563 579 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 CKS1BP2-201ENST00000497342 240 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 RPL23AP63-201ENST00000498752 471 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 RN7SL853P-201ENST00000617250 223 ntBASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.24□□□□□ -2.21
HHLA3Q9XRX5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 RNU1-23P-201ENST00000363361 144 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 Y_RNA.192-201ENST00000363977 102 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 RNU6-1280P-201ENST00000365211 107 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 RNU6-898P-201ENST00000365627 104 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 MIR518D-201ENST00000385014 87 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 ERHP2-201ENST00000402323 299 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 RN7SKP266-201ENST00000410232 287 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 POLHP1-201ENST00000411806 470 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 RPL23AP39-201ENST00000415533 405 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AP000949.1-201ENST00000438328 629 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 USP9YP15-201ENST00000442391 422 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC007327.1-201ENST00000447461 264 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AL441985.1-201ENST00000457727 251 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 CYP2C59P-201ENST00000457790 269 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 snoU13.15-201ENST00000459407 104 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC117503.1-201ENST00000472241 394 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 RPL7P43-201ENST00000478876 753 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC027575.1-201ENST00000481064 460 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC104629.1-201ENST00000494226 508 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 HMGB1P35-201ENST00000503360 598 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC016550.1-201ENST00000505348 785 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC109445.1-201ENST00000512356 383 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 RNU6-276P-201ENST00000516114 96 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC104581.2-201ENST00000572227 430 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 NDUFA8P1-201ENST00000605525 367 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 PART1_2.1-201ENST00000612397 250 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC006386.1-201ENST00000619436 415 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC084768.2-201ENST00000622736 221 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 AC002543.1-201ENST00000299783 1954 ntBASIC1.23□□□□□ -2.21
HHLA3Q9XRX5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HHLA3Q9XRX5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.22□□□□□ -2.21
HHLA3Q9XRX5 AC092125.1-201ENST00000562568 1995 ntBASIC1.22□□□□□ -2.21
HHLA3Q9XRX5 AL356292.1-201ENST00000283110 373 ntBASIC1.22□□□□□ -2.21
HHLA3Q9XRX5 U8.3-201ENST00000363321 132 ntBASIC1.22□□□□□ -2.21
HHLA3Q9XRX5 RNU6-1284P-201ENST00000363701 100 ntBASIC1.22□□□□□ -2.21
HHLA3Q9XRX5 RNU6-701P-201ENST00000384059 107 ntBASIC1.22□□□□□ -2.21
HHLA3Q9XRX5 RNU6-1032P-201ENST00000384100 107 ntBASIC1.22□□□□□ -2.21
HHLA3Q9XRX5 MIR518A2-201ENST00000384966 87 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms