Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RN7SL327P-201ENST00000488659 223 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 SNORA31.3-201ENST00000516029 96 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AF235103.2-201ENST00000525753 346 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AC060780.3-201ENST00000589464 80 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 DPPA3P3-201ENST00000603842 430 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AC007619.2-201ENST00000605743 379 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 RN7SL853P-201ENST00000617250 223 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 AC103710.2-202ENST00000641454 2853 ntBASIC4.76□□□□□ -1.65
CDK11AQ9UQ88 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 MIR30E-201ENST00000362104 92 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 RNU6-851P-201ENST00000384565 107 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 Y_RNA.576-201ENST00000384781 102 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 OR6C66P-201ENST00000414917 930 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AL109913.1-201ENST00000421173 514 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 BX679664.1-201ENST00000434429 253 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 RPL7P5-201ENST00000471472 736 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 RPL38P4-201ENST00000502376 214 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 ATP5F1P5-201ENST00000526403 760 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 BNIP3P30-201ENST00000601184 574 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AC012409.4-201ENST00000612923 249 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 DUXAP9-208ENST00000622815 614 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AC009033.1-201ENST00000624279 431 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AC091903.1-201ENST00000624322 454 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 CASC19-280ENST00000642102 1351 ntBASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK11AQ9UQ88 AL139276.1-201ENST00000311910 1001 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 RNU6-552P-201ENST00000362869 119 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 RNU6-903P-201ENST00000391270 109 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 RNU6-876P-201ENST00000391295 104 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 RNU6-1068P-201ENST00000410958 103 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 SNRPFP3-201ENST00000457792 225 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 AC117440.1-201ENST00000474107 571 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 TRBV1-201ENST00000476502 284 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 SNORA31.21-201ENST00000517180 77 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 AC034102.8-201ENST00000615146 484 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 MTND5P42-201ENST00000637720 498 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 AC024614.3-201ENST00000637860 256 ntBASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CDK11AQ9UQ88 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 Y_RNA.390-201ENST00000383932 102 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 RNY3P14-201ENST00000384309 102 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 RNU4-46P-201ENST00000410818 138 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 RNU6-193P-201ENST00000410977 107 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 MTND4P25-201ENST00000441039 533 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 AL162395.1-201ENST00000457882 422 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 snoU13.28-201ENST00000459235 104 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 AC087588.1-201ENST00000462203 316 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 KC877373.1-201ENST00000479066 408 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 AC092436.1-201ENST00000506450 503 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 RNU4-29P-201ENST00000515943 174 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 RNU6-928P-201ENST00000516876 104 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 AL158032.1-201ENST00000605401 106 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 AL161629.2-201ENST00000615347 275 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 AC073476.4-201ENST00000628409 72 ntBASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.73□□□□□ -1.65
CDK11AQ9UQ88 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 RNU6-14P-201ENST00000384630 106 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AL606923.1-201ENST00000406616 190 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 RNU2-33P-201ENST00000410344 192 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AC105272.1-201ENST00000438604 198 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AC091179.1-201ENST00000461606 579 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AP002884.2-201ENST00000471647 395 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 RPL23AP11-201ENST00000475260 469 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 EIF4EP3-201ENST00000498782 656 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 Y_RNA.689-201ENST00000516589 107 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AP005435.4-201ENST00000529514 284 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AL121579.1-201ENST00000555129 305 ntBASIC4.72□□□□□ -1.65
CDK11AQ9UQ88 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms