| CNTN6 | Q9UQ52 | SNORA31.19-201 | ENST00000517079 | 126 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC068657.1-201 | ENST00000520807 | 306 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | HTN3-202 | ENST00000526767 | 578 nt | APPRIS P2 TSL 1 (best) BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | TRAV37-201 | ENST00000553906 | 342 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | OR11H5P-201 | ENST00000554039 | 926 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | MIR3186-201 | ENST00000577404 | 85 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC007631.1-201 | ENST00000578545 | 189 nt | TSL 3 BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC073539.2-201 | ENST00000597113 | 165 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC007938.3-201 | ENST00000604965 | 623 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC008162.2-201 | ENST00000613352 | 291 nt | APPRIS P1 TSL 3 BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC084757.4-201 | ENST00000616350 | 526 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | CYP3A43-217 | ENST00000631161 | 328 nt | TSL 5 BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | U2.21-201 | ENST00000637295 | 81 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | U6.99-201 | ENST00000637524 | 83 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC100810.6-201 | ENST00000638068 | 285 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | PHF6-205 | ENST00000625464 | 4434 nt | APPRIS ALT1 TSL 5 BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | ADAMTS9-AS1-207 | ENST00000594810 | 3609 nt | TSL 4 BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | MTND5P7-201 | ENST00000413558 | 1798 nt | BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | BCLAF1-205 | ENST00000527536 | 5371 nt | TSL 5 BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | FRS2-201 | ENST00000397997 | 6550 nt | APPRIS P1 TSL 5 BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | TFEC-201 | ENST00000265440 | 6628 nt | TSL 1 (best) BASIC | 3.33 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | Y_RNA.86-201 | ENST00000363020 | 111 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | Y_RNA.378-201 | ENST00000365652 | 113 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | SNORA40C-201 | ENST00000391285 | 128 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RPS4XP7-201 | ENST00000406274 | 780 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | POLHP1-201 | ENST00000411806 | 470 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC138393.2-201 | ENST00000414742 | 246 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | BX682237.1-201 | ENST00000415016 | 335 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RPS15AP6-201 | ENST00000420703 | 385 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | HSPE1P1-201 | ENST00000421494 | 318 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AL513365.2-201 | ENST00000423060 | 529 nt | TSL 2 BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC007560.1-201 | ENST00000426912 | 237 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AL355314.2-201 | ENST00000427182 | 436 nt | TSL 3 BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | MYL8P-204 | ENST00000431574 | 518 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | NEK4P1-201 | ENST00000433383 | 879 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | MTATP6P7-201 | ENST00000453315 | 681 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | PRSS3P4-201 | ENST00000453323 | 162 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | LINC01774-201 | ENST00000453569 | 595 nt | TSL 2 BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC010099.1-201 | ENST00000455434 | 375 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU7-167P-201 | ENST00000459160 | 62 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU6-189P-201 | ENST00000516120 | 101 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU6-572P-201 | ENST00000516724 | 80 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU6-703P-201 | ENST00000516946 | 107 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AL118558.2-201 | ENST00000556294 | 238 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC118755.2-201 | ENST00000584676 | 212 nt | TSL 3 BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC008739.1-201 | ENST00000598137 | 575 nt | TSL 2 BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC092807.2-201 | ENST00000609367 | 243 nt | BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | C8orf59-208 | ENST00000612809 | 475 nt | APPRIS P1 TSL 1 (best) BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | EVI2A-201 | ENST00000247270 | 1860 nt | APPRIS P3 TSL 2 BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | SPZ1-201 | ENST00000296739 | 1868 nt | APPRIS P2 BASIC | 3.32 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | CADM2-AS1-201 | ENST00000476021 | 2656 nt | TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC091152.2-201 | ENST00000591628 | 2569 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU6-778P-201 | ENST00000363269 | 103 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | SNORA72.1-201 | ENST00000363485 | 129 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | BTLA-202 | ENST00000383680 | 726 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU1-73P-201 | ENST00000383971 | 164 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | SNORA75B-201 | ENST00000384053 | 137 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | Y_RNA.480-201 | ENST00000384364 | 102 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | Y_RNA.615-201 | ENST00000410769 | 117 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | NDUFS5P4-201 | ENST00000412983 | 318 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AL359195.1-201 | ENST00000416657 | 339 nt | TSL 3 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AL353621.1-201 | ENST00000418219 | 243 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AL353729.1-201 | ENST00000425044 | 720 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AL078601.1-201 | ENST00000444542 | 271 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RPL26P9-201 | ENST00000457466 | 433 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC092798.1-201 | ENST00000458542 | 409 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC092919.1-201 | ENST00000467896 | 229 nt | TSL 2 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | HMGN2P13-201 | ENST00000476476 | 274 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RPL21P93-201 | ENST00000480465 | 489 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC026801.1-201 | ENST00000497178 | 464 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | MTND3P25-201 | ENST00000509243 | 135 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC098799.2-201 | ENST00000509466 | 868 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | HIGD1AP13-201 | ENST00000509878 | 289 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU6-711P-201 | ENST00000517255 | 106 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | FAM92A-209 | ENST00000519679 | 538 nt | TSL 4 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AP002992.1-202 | ENST00000530842 | 551 nt | TSL 2 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | OOSP2-203 | ENST00000532905 | 496 nt | APPRIS ALT2 TSL 3 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC008083.3-201 | ENST00000547777 | 329 nt | TSL 3 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | H3F3AP1-201 | ENST00000559984 | 334 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | MIR4782-201 | ENST00000577987 | 79 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC005730.3-201 | ENST00000583067 | 366 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | UBL5P2-201 | ENST00000583788 | 219 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AL683887.1-201 | ENST00000603401 | 287 nt | TSL 3 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC092747.3-201 | ENST00000603769 | 301 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | XIST_intron.1-201 | ENST00000619444 | 68 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC244517.5-202 | ENST00000623741 | 500 nt | TSL 3 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AP003122.6-201 | ENST00000623831 | 495 nt | BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | SLC8A1-207 | ENST00000406785 | 20987 nt | TSL 1 (best) BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | TECRL-202 | ENST00000507440 | 2876 nt | TSL 5 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | SLC27A2-203 | ENST00000544960 | 2025 nt | TSL 2 BASIC | 3.31 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | SLC39A10-202 | ENST00000409086 | 5432 nt | APPRIS P1 TSL 1 (best) BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | PRKD3-202 | ENST00000379066 | 6111 nt | APPRIS P1 TSL 5 BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | EMCN-202 | ENST00000305864 | 1575 nt | TSL 1 (best) BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | C5orf46-201 | ENST00000318315 | 506 nt | APPRIS P2 TSL 1 (best) BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | AC073325.2-201 | ENST00000339545 | 159 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | MIR148B-201 | ENST00000362252 | 99 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | Y_RNA.100-201 | ENST00000363141 | 102 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU6-522P-201 | ENST00000364497 | 107 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | RNU5E-4P-201 | ENST00000364931 | 120 nt | BASIC | 3.3 | □□□□□ -1.88 | | |
| CNTN6 | Q9UQ52 | Y_RNA.373-201 | ENST00000365600 | 103 nt | BASIC | 3.3 | □□□□□ -1.88 | | |