Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 uc_338.11-201ENST00000619132 160 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AL359880.1-201ENST00000621879 266 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 AC139792.3-201ENST00000623525 224 ntBASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
LIMA1Q9UHB6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 RNA5SP374-201ENST00000362939 125 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 RNU6-1215P-201ENST00000384441 102 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AL591416.1-201ENST00000404015 867 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 RNU4-46P-201ENST00000410818 138 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 MRPL50P4-201ENST00000446432 475 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 RPS26P21-201ENST00000475397 348 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AC091826.1-201ENST00000514065 313 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AC112206.3-201ENST00000514578 389 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 SCARNA13-201ENST00000516672 275 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AP001893.2-201ENST00000526949 202 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 ZNF861P-201ENST00000588126 639 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 SRGNP1-201ENST00000603392 451 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 AL161431.1-201ENST00000618966 4205 ntBASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
LIMA1Q9UHB6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 MTND5P1-201ENST00000445440 1375 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 Y_RNA.381-201ENST00000365666 102 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 Z98749.2-208ENST00000381646 500 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 Y_RNA.409-201ENST00000383990 98 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 RNU6-166P-201ENST00000384371 107 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 MIR578-201ENST00000384828 96 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 RNU6-1158P-201ENST00000391167 107 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AL512633.1-201ENST00000399931 655 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 MIR887-201ENST00000401258 79 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AL356057.2-201ENST00000403318 432 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 RPS3AP44-201ENST00000425466 790 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AL360271.2-201ENST00000447710 161 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 HMGN2P10-201ENST00000448085 265 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 PSPHP1-201ENST00000450062 261 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AL118520.1-201ENST00000450770 291 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AL583843.1-201ENST00000456070 346 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC027673.1-201ENST00000456245 405 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC083906.5-201ENST00000503722 328 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC105417.1-201ENST00000514691 285 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 MTND1P5-201ENST00000517906 940 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC007536.1-201ENST00000533382 349 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 CYCSP39-201ENST00000565821 309 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 MTATP6P3-201ENST00000581686 676 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AL451007.1-201ENST00000595491 289 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC008739.2-201ENST00000597006 317 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AL355877.2-201ENST00000603670 358 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AP001330.5-201ENST00000607176 411 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 ADAM3A-203ENST00000461344 2157 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 AC099654.7-201ENST00000635788 2127 ntBASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
LIMA1Q9UHB6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 SNORD3E-201ENST00000362899 217 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 RNU6-517P-201ENST00000384362 110 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 CALM2P3-201ENST00000400429 449 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 UBE2V1P10-201ENST00000414685 269 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC000111.3-201ENST00000433478 193 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 MTND1P4-201ENST00000435196 415 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 GMFBP1-201ENST00000467831 427 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 TRBV1-201ENST00000476502 284 ntBASIC3.04□□□□□ -1.92
LIMA1Q9UHB6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms