Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 RNU6-1197P-201ENST00000391183 107 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 RPL5P18-201ENST00000406671 891 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 UBE2D3P2-201ENST00000424409 445 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 CALM2P2-201ENST00000428512 440 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC009237.8-201ENST00000445492 379 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 RPL21P99-201ENST00000480369 423 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 RPL39P36-201ENST00000490784 156 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 MTCYBP18-201ENST00000501056 747 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC098591.2-201ENST00000510152 315 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 RNU6-685P-201ENST00000517088 95 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC009812.2-201ENST00000517657 457 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AP002404.1-201ENST00000532005 451 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AL121579.1-201ENST00000555129 305 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC060780.3-201ENST00000589464 80 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AL138889.2-201ENST00000603883 242 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 uc_338.34-201ENST00000617467 174 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 GABRG2-229ENST00000641017 3628 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDH9Q9HC56 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
PCDH9Q9HC56 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 MTND4P35-201ENST00000604257 1375 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 SNORA14A-201ENST00000364773 135 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 RNU6-867P-201ENST00000364956 107 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 RNU4-20P-201ENST00000365601 151 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 MIR181B1-201ENST00000385240 110 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AL356776.1-201ENST00000406574 447 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 RNU4-46P-201ENST00000410818 138 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC022028.1-201ENST00000412054 408 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC138393.2-201ENST00000414742 246 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 Z85995.1-201ENST00000415547 335 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC104332.2-201ENST00000429959 156 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AL121601.2-201ENST00000438019 707 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC104058.1-201ENST00000448028 297 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 RNU6-914P-201ENST00000516749 109 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 RNU6-143P-201ENST00000516942 93 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 RNA5SP290-201ENST00000517133 127 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 MTND4P7-201ENST00000523876 130 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AL138976.2-201ENST00000563989 694 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC010653.1-201ENST00000571108 881 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC005730.3-201ENST00000583067 366 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 MIR4506-201ENST00000584693 77 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 BNIP3P10-201ENST00000605360 577 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AP001486.3-201ENST00000615334 372 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AP003122.6-201ENST00000623831 495 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AL512643.1-201ENST00000635735 524 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 Z99571.1-201ENST00000636677 394 ntBASIC3.03□□□□□ -1.92
PCDH9Q9HC56 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
PCDH9Q9HC56 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 MTND5P7-201ENST00000413558 1798 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL139276.1-201ENST00000311910 1001 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 SNORA72.1-201ENST00000363485 129 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 Y_RNA.245-201ENST00000364493 95 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 SNORA4.3-201ENST00000365564 137 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RNU6-38P-201ENST00000384085 107 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 FGF7P8-201ENST00000402994 292 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL138885.1-201ENST00000405921 675 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL031121.1-201ENST00000406553 254 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 Y_RNA.615-201ENST00000410769 117 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RNU6-373P-201ENST00000411247 98 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AL160275.3-201ENST00000423876 471 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RPL36AP53-201ENST00000432891 316 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 TAAR7P-201ENST00000436141 242 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RNU6-333P-201ENST00000459117 107 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RNU7-180P-201ENST00000459240 63 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 AC087588.1-201ENST00000462203 316 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RPL27AP5-201ENST00000469428 449 ntBASIC3.02□□□□□ -1.93
PCDH9Q9HC56 RPS20P22-201ENST00000473700 357 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms