Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AP003122.4-201ENST00000530980 758 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC002545.1-201ENST00000592511 181 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AL356280.1-201ENST00000603614 379 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 RNU6-87P-201ENST00000607561 108 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC239868.4-201ENST00000608318 671 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC009318.2-201ENST00000610917 651 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC073114.1-201ENST00000612027 490 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC025594.3-201ENST00000613068 790 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 Z69908.1-201ENST00000622603 247 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC091953.2-201ENST00000623979 160 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AL359757.2-201ENST00000624309 274 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 MTND1P37-201ENST00000636562 264 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC099654.13-201ENST00000639774 207 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 MTND5P29-201ENST00000458676 1807 ntBASIC2.26□□□□□ -2.05
NXF3Q9H4D5 AC092104.1-201ENST00000497346 1441 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 FGF7P2-201ENST00000332473 296 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 Y_RNA.77-201ENST00000362962 107 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 RNU6-1284P-201ENST00000363701 100 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 SNORA80E-201ENST00000384744 137 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 RNY3P10-201ENST00000384764 102 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 MIR764-201ENST00000390811 85 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AL359634.1-202ENST00000404721 284 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 U3.37-201ENST00000408528 213 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 RNU2-62P-201ENST00000410868 191 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AL451054.2-201ENST00000420896 202 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 LARP1BP2-201ENST00000486594 519 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 EIF4EP3-201ENST00000498782 656 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 MTND4P2-201ENST00000507767 1203 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AC093012.1-202ENST00000549403 582 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 RPL21P5-201ENST00000554662 472 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AL355877.2-201ENST00000603670 358 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AC008498.1-201ENST00000613012 531 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AL158063.1-201ENST00000615349 536 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 HMGB1P24-202ENST00000615653 685 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AC108479.2-201ENST00000617314 601 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 AC241585.2-209ENST00000638217 143 ntBASIC2.25□□□□□ -2.05
NXF3Q9H4D5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NXF3Q9H4D5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 MIRLET7G-201ENST00000362280 84 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 RNY4P16-201ENST00000364768 94 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 RNY3P13-201ENST00000365542 102 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 SNORD116-9-201ENST00000384000 95 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 SNORD116-3-201ENST00000384287 95 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 SNORD116-1-201ENST00000384335 95 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 SNORD116-7-201ENST00000384404 95 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 SNORD116-5-201ENST00000384462 95 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 ELOCP17-201ENST00000414751 326 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 MTCO3P30-201ENST00000426425 670 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 GTF2IP20-201ENST00000431663 360 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 DDX3P2-201ENST00000446138 111 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC020550.1-201ENST00000447385 163 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 MTND1P12-201ENST00000455231 147 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC013267.1-201ENST00000458227 267 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 RNU7-26P-201ENST00000458980 63 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC093534.1-201ENST00000504977 132 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 MRPS36P2-201ENST00000512569 299 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AP003181.2-201ENST00000528941 181 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC007115.1-201ENST00000546853 234 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC009977.1-201ENST00000586015 570 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 BNIP3P8-201ENST00000597863 560 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AC135507.1-201ENST00000607214 561 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AL449363.1-201ENST00000617815 186 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 AL136313.1-201ENST00000624804 202 ntBASIC2.24□□□□□ -2.05
NXF3Q9H4D5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NXF3Q9H4D5 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 RNU4-1-201ENST00000363925 141 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 RNU6-140P-201ENST00000384566 108 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 HMGN1P14-201ENST00000412459 517 ntBASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.23□□□□□ -2.05
NXF3Q9H4D5 AC006366.1-201ENST00000422002 759 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms