Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC092608.2-201ENST00000624427 218 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 CDC27P3-201ENST00000635418 1910 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 AC008725.1-201ENST00000605123 2263 ntBASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM55Q9BYV6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM55Q9BYV6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM55Q9BYV6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
TRIM55Q9BYV6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
TRIM55Q9BYV6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM55Q9BYV6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.15□□□□□ -1.74
TRIM55Q9BYV6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM55Q9BYV6 Y_RNA.2-201ENST00000362330 96 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.197-201ENST00000364004 102 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.326-201ENST00000365176 113 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.395-201ENST00000383945 109 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AL513475.1-201ENST00000406602 315 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 USMG5P1-201ENST00000425964 177 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 ATP5HP2-201ENST00000433885 485 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 CYCSP32-201ENST00000440548 321 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AL118496.2-201ENST00000448300 230 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 RPL23AP14-201ENST00000468281 468 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 RPL31P61-201ENST00000496160 376 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 SCARNA15.1-201ENST00000516384 125 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 SNORA43.2-201ENST00000516652 128 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 TRAV8-5-201ENST00000537369 341 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AC005476.1-201ENST00000554427 397 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AC034105.4-201ENST00000568304 277 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AC020895.1-201ENST00000595362 272 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 MIR3976-201ENST00000606807 139 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.812-201ENST00000610788 101 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.784-201ENST00000613803 101 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AC004852.3-201ENST00000614131 326 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.787-201ENST00000616522 101 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.780-201ENST00000617336 101 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.801-201ENST00000619005 101 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AC006111.3-201ENST00000622137 383 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 AC106871.1-201ENST00000568324 3102 ntBASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM55Q9BYV6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 MIR383-201ENST00000362257 73 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 MIR331-201ENST00000362302 94 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 RNU6-942P-201ENST00000363002 107 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 RNU6-336P-201ENST00000364891 107 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 RNU1-100P-201ENST00000365255 165 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 RNU6-1040P-201ENST00000383974 107 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.445-201ENST00000384168 102 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 SNORA75.6-201ENST00000391318 127 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC005300.1-201ENST00000428401 373 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 Z82205.1-201ENST00000428456 297 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AL714022.1-201ENST00000439897 151 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 HMGN2P10-201ENST00000448085 265 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 MIR2053-201ENST00000459295 91 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 U8.21-201ENST00000459536 136 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.631-201ENST00000459607 101 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC008571.1-201ENST00000467232 300 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 RNA5SP384-201ENST00000516615 116 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 MIR4644-201ENST00000579929 84 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 MIR3171-201ENST00000584270 74 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC022432.1-201ENST00000595739 310 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC024153.1-201ENST00000603103 365 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 SRGNP1-201ENST00000603392 451 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC113403.1-201ENST00000604910 193 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC005046.1-201ENST00000608515 625 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC011890.2-201ENST00000613393 294 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AL773545.4-201ENST00000637262 310 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AL513478.4-201ENST00000641636 310 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 OTUD4P1-201ENST00000237841 3067 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 AC007823.1-201ENST00000569932 1566 ntBASIC4.14□□□□□ -1.75
TRIM55Q9BYV6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM55Q9BYV6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms