Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RNU6-1271P-201ENST00000517049 105 ntBASIC4.13□□□□□ -1.75
TM9SF2Q99805 AP001781.1-201ENST00000530977 207 ntBASIC4.13□□□□□ -1.75
TM9SF2Q99805 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF2Q99805 MYL12BP1-201ENST00000569826 507 ntBASIC4.13□□□□□ -1.75
TM9SF2Q99805 AC024153.1-201ENST00000603103 365 ntBASIC4.13□□□□□ -1.75
TM9SF2Q99805 MTND4LP5-201ENST00000605152 292 ntBASIC4.13□□□□□ -1.75
TM9SF2Q99805 AL356218.2-201ENST00000605264 187 ntBASIC4.13□□□□□ -1.75
TM9SF2Q99805 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.13□□□□□ -1.75
TM9SF2Q99805 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TM9SF2Q99805 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF2Q99805 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
TM9SF2Q99805 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TM9SF2Q99805 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TM9SF2Q99805 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.13□□□□□ -1.75
TM9SF2Q99805 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM9SF2Q99805 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF2Q99805 SNORA63.7-201ENST00000365579 123 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 MIR518D-201ENST00000385014 87 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 Y_RNA.592-201ENST00000410274 109 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TM9SF2Q99805 USP9YP16-201ENST00000430287 407 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 USP9YP23-201ENST00000455085 407 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 RNA5SP310-201ENST00000459084 116 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 AC105129.1-201ENST00000560250 297 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 AC091178.1-203ENST00000584586 279 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 AL021997.2-201ENST00000615674 271 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 AC048347.1-201ENST00000624621 427 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 AC241585.2-209ENST00000638217 143 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 AC009541.1-201ENST00000438279 2662 ntBASIC4.12□□□□□ -1.75
TM9SF2Q99805 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.12□□□□□ -1.75
TM9SF2Q99805 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TM9SF2Q99805 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 RNU6-1035P-201ENST00000384477 107 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 Y_RNA.551-201ENST00000384661 102 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TM9SF2Q99805 RNU6-1245P-201ENST00000411130 106 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 ELOCP19-201ENST00000411919 318 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 AP000275.1-201ENST00000411943 390 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TM9SF2Q99805 PCNPP5-201ENST00000452246 481 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 RNU7-87P-201ENST00000459343 62 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 RPL23AP14-201ENST00000468281 468 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 AC034236.1-201ENST00000469891 373 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 PPBPP1-201ENST00000510807 373 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 AC093840.1-201ENST00000511599 336 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 MIR4277-201ENST00000578298 84 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 AC006557.5-201ENST00000603126 811 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 AL390123.1-201ENST00000603216 237 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 AC006077.1-201ENST00000604746 343 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 AC012468.1-201ENST00000604888 430 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 uc_338.32-201ENST00000615087 172 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
TM9SF2Q99805 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TM9SF2Q99805 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.11□□□□□ -1.75
TM9SF2Q99805 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TM9SF2Q99805 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TM9SF2Q99805 CUL1P1-201ENST00000509510 2425 ntBASIC4.11□□□□□ -1.75
TM9SF2Q99805 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TM9SF2Q99805 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF2Q99805 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 RNA5SP447-201ENST00000363749 119 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 RNU6-1318P-201ENST00000365389 103 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 Y_RNA.405-201ENST00000383979 100 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 Y_RNA.451-201ENST00000384200 100 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 Y_RNA.524-201ENST00000384564 100 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 Y_RNA.561-201ENST00000384694 100 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 MIR190B-201ENST00000401119 79 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 MTCYBP2-201ENST00000407745 171 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 NDUFS5P4-201ENST00000412983 318 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 AC073910.1-201ENST00000445047 438 ntBASIC4.1□□□□□ -1.75
TM9SF2Q99805 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF2Q99805 HMGN2P16-201ENST00000456802 261 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms