Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 XIAPP1-201ENST00000603162 600 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 MTCO2P22-201ENST00000603246 681 ntBASIC0.25□□□□□ -2.37
COL12A1Q99715 RNY4P27-201ENST00000363341 96 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 Y_RNA.493-201ENST00000384422 102 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 RPS3AP24-201ENST00000407896 734 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 EIF4EP4-201ENST00000424916 578 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 HMGN2P22-201ENST00000427588 175 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.24□□□□□ -2.37
COL12A1Q99715 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.24□□□□□ -2.37
COL12A1Q99715 COX7A2P2-201ENST00000505291 250 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AC133963.2-201ENST00000513686 578 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.24□□□□□ -2.37
COL12A1Q99715 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.24□□□□□ -2.37
COL12A1Q99715 CENPUP2-201ENST00000555897 1186 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 MIR4645-201ENST00000583158 77 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.24□□□□□ -2.37
COL12A1Q99715 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.24□□□□□ -2.37
COL12A1Q99715 uc_338.6-201ENST00000613544 171 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AC027335.2-201ENST00000624030 375 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.24□□□□□ -2.37
COL12A1Q99715 RNU6-45P-201ENST00000384471 107 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AL356421.1-201ENST00000403255 413 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AC092393.1-201ENST00000439625 742 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 TRGVB-201ENST00000453257 471 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AC067940.1-201ENST00000458411 300 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.24□□□□□ -2.37
COL12A1Q99715 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.24□□□□□ -2.37
COL12A1Q99715 AC009712.1-201ENST00000564938 316 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AC025449.1-201ENST00000603896 529 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 MIR6130-201ENST00000619419 109 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AC011155.2-201ENST00000623202 216 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 U3.13-201ENST00000364804 214 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 PIGPP2-201ENST00000411569 458 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 AL356320.2-201ENST00000417263 507 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.24□□□□□ -2.37
COL12A1Q99715 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.24□□□□□ -2.37
COL12A1Q99715 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.24□□□□□ -2.37
COL12A1Q99715 AC090132.2-201ENST00000615881 347 ntBASIC0.24□□□□□ -2.37
COL12A1Q99715 Y_RNA.490-201ENST00000384413 102 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 MIR224-201ENST00000384889 81 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AL117342.1-201ENST00000404861 406 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 RPL21P32-201ENST00000419877 477 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 ISCA1P1-201ENST00000426679 387 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.23□□□□□ -2.37
COL12A1Q99715 AL354941.1-201ENST00000438600 464 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 RNU6-775P-201ENST00000459318 96 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.23□□□□□ -2.37
COL12A1Q99715 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.23□□□□□ -2.37
COL12A1Q99715 AC006518.2-201ENST00000542513 940 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AC019288.1-201ENST00000557918 224 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.23□□□□□ -2.37
COL12A1Q99715 AC090666.1-201ENST00000578241 445 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.23□□□□□ -2.37
COL12A1Q99715 AC016925.2-201ENST00000605108 242 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AL161423.1-201ENST00000613700 262 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AP002791.1-201ENST00000623291 381 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AP003072.4-201ENST00000624580 310 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.23□□□□□ -2.37
COL12A1Q99715 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.23□□□□□ -2.37
COL12A1Q99715 RPEP5-201ENST00000441137 268 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AC016717.1-201ENST00000448918 286 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AL157398.1-201ENST00000452981 186 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AC108157.1-201ENST00000510511 539 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.23□□□□□ -2.37
COL12A1Q99715 AL021879.1-201ENST00000611756 288 ntBASIC0.23□□□□□ -2.37
COL12A1Q99715 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.23□□□□□ -2.37
COL12A1Q99715 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
COL12A1Q99715 RPL7P29-201ENST00000437151 728 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 RPL23AP33-201ENST00000442301 452 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.22□□□□□ -2.37
COL12A1Q99715 RPL23AP3-201ENST00000453844 468 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 snoU13.21-201ENST00000459368 105 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 RNU6-287P-201ENST00000516230 98 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 IGKV1-22-201ENST00000524313 326 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.22□□□□□ -2.37
COL12A1Q99715 AP001269.3-201ENST00000588718 329 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.22□□□□□ -2.37
COL12A1Q99715 Z83818.1-201ENST00000603584 150 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AL450336.1-201ENST00000605180 586 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.22□□□□□ -2.37
COL12A1Q99715 MIR4320-201ENST00000636981 65 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 MIR618-201ENST00000385287 98 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AL590556.1-201ENST00000423231 483 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.22□□□□□ -2.37
COL12A1Q99715 RPL31P20-201ENST00000449593 360 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.22□□□□□ -2.37
COL12A1Q99715 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.22□□□□□ -2.37
COL12A1Q99715 AC104108.1-201ENST00000509930 412 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 PSMC1P5-201ENST00000512850 177 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.22□□□□□ -2.37
COL12A1Q99715 OR1M4P-201ENST00000589199 287 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 FRG1HP-204ENST00000617940 757 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC073308.1-201ENST00000623696 305 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.22□□□□□ -2.37
COL12A1Q99715 RNU4-9P-201ENST00000364951 139 ntBASIC0.22□□□□□ -2.37
COL12A1Q99715 AC013410.2-201ENST00000422627 201 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms