Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 Y_RNA.672-201ENST00000516289 104 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 RNU6-1315P-201ENST00000517187 99 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC006362.1-201ENST00000567392 174 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC090578.1-201ENST00000604955 591 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC004805.2-201ENST00000605382 482 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC099654.7-201ENST00000635788 2127 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 RNU6-181P-201ENST00000363225 107 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 RNU1-138P-201ENST00000384093 164 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 USP9YP27-201ENST00000418455 438 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.07□□□□□ -2.08
SCN2AQ99250 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 CALM2P2-201ENST00000428512 440 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 RPL23AP30-201ENST00000432419 501 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC092573.2-201ENST00000434546 243 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SCN2AQ99250 RPL23AP20-201ENST00000447965 421 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 MTCO2P29-201ENST00000465212 189 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC105417.1-201ENST00000514691 285 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 RNU6-927P-201ENST00000516199 100 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 RNU6-445P-201ENST00000516949 107 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC022634.1-201ENST00000520765 532 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 OR5BN1P-201ENST00000532955 829 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC110760.3-201ENST00000598794 467 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SCN2AQ99250 AC012409.4-201ENST00000612923 249 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 MIR219B-201ENST00000637023 88 ntBASIC2.07□□□□□ -2.08
SCN2AQ99250 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.06□□□□□ -2.08
SCN2AQ99250 AC110491.1-201ENST00000562191 2010 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 RNU6-1180P-201ENST00000364935 107 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SCN2AQ99250 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 RN7SKP142-201ENST00000411236 328 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN2AQ99250 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.06□□□□□ -2.08
SCN2AQ99250 OR6C66P-201ENST00000414917 930 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 BX682237.1-201ENST00000415016 335 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.06□□□□□ -2.08
SCN2AQ99250 AL365338.1-201ENST00000422282 858 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SCN2AQ99250 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN2AQ99250 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN2AQ99250 MICF-203ENST00000432679 129 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.06□□□□□ -2.08
SCN2AQ99250 IFNA11P-201ENST00000446352 526 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 RPL37P6-201ENST00000460682 294 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 Y_RNA.688-201ENST00000516565 95 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN2AQ99250 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN2AQ99250 HSPE1P20-201ENST00000538133 289 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SCN2AQ99250 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SCN2AQ99250 AC025281.1-201ENST00000567026 265 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN2AQ99250 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.06□□□□□ -2.08
SCN2AQ99250 AC022079.1-201ENST00000621546 602 ntBASIC2.06□□□□□ -2.08
SCN2AQ99250 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.06□□□□□ -2.08
SCN2AQ99250 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCN2AQ99250 RNU6-1103P-201ENST00000384150 107 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 RNU6-1035P-201ENST00000384477 107 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 GSTA9P-201ENST00000406231 611 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 MIR1289-2-201ENST00000408360 111 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 RPL26P27-201ENST00000414397 437 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN2AQ99250 RPL36AP53-201ENST00000432891 316 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 RPL7P12-201ENST00000446719 750 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 FABP5P13-201ENST00000452144 328 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 MTND2P24-201ENST00000453434 806 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 SNRPGP9-201ENST00000456025 225 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 RPL26P9-201ENST00000457466 433 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 MRPS36P2-201ENST00000512569 299 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN2AQ99250 AC022447.1-201ENST00000515358 464 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 Vault.3-201ENST00000516676 95 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN2AQ99250 AC090888.1-201ENST00000561335 1141 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 NBR2-204ENST00000587322 63 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AF038458.1-201ENST00000588406 262 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AC008739.2-201ENST00000597006 317 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AC103710.2-201ENST00000609912 942 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 TUG1_2.1-201ENST00000614234 87 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.05□□□□□ -2.08
SCN2AQ99250 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN2AQ99250 RNY1P12-201ENST00000364251 105 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 RNU6-1029P-201ENST00000384109 107 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AL356057.2-201ENST00000403318 432 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.05□□□□□ -2.08
SCN2AQ99250 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.05□□□□□ -2.08
SCN2AQ99250 AC098831.1-201ENST00000440661 216 ntBASIC2.05□□□□□ -2.08
SCN2AQ99250 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms