Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPS20P10-201ENST00000451209 253 ntBASIC1.04□□□□□ -2.24
IFT140Q96RY7 HMGB1P36-201ENST00000487709 576 ntBASIC1.04□□□□□ -2.24
IFT140Q96RY7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.04□□□□□ -2.24
IFT140Q96RY7 AC018618.2-201ENST00000604770 446 ntBASIC1.04□□□□□ -2.24
IFT140Q96RY7 RNU6-921P-201ENST00000384361 107 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.03□□□□□ -2.24
IFT140Q96RY7 RPP40P1-201ENST00000426762 456 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.03□□□□□ -2.24
IFT140Q96RY7 MTND6P13-201ENST00000443510 523 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.03□□□□□ -2.24
IFT140Q96RY7 AC098591.2-201ENST00000510152 315 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 AC107953.1-201ENST00000522216 297 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.03□□□□□ -2.24
IFT140Q96RY7 AP000403.1-201ENST00000603349 851 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 AL078605.1-201ENST00000603529 500 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 AC021851.1-201ENST00000608537 1082 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 AC104763.3-201ENST00000613765 618 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.03□□□□□ -2.24
IFT140Q96RY7 AC009950.2-201ENST00000636548 183 ntBASIC1.03□□□□□ -2.24
IFT140Q96RY7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
IFT140Q96RY7 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 SNORD26-201ENST00000384147 75 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 AC241584.1-201ENST00000438469 1241 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 AC092757.1-201ENST00000467293 467 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.02□□□□□ -2.25
IFT140Q96RY7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.02□□□□□ -2.25
IFT140Q96RY7 BNIP3P25-201ENST00000596023 559 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 AC138473.1-201ENST00000605717 526 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 AC011374.2-201ENST00000607135 526 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 AC009318.4-201ENST00000620496 486 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 AC008443.7-201ENST00000622195 246 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 LINC02211-204ENST00000642024 1070 ntBASIC1.02□□□□□ -2.25
IFT140Q96RY7 SNORA8-201ENST00000384574 139 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 RNA5SP212-201ENST00000391223 107 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 RPL23AP32-201ENST00000395315 459 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.01□□□□□ -2.25
IFT140Q96RY7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.01□□□□□ -2.25
IFT140Q96RY7 MTCO3P17-201ENST00000443775 513 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 SNORA31.6-201ENST00000516241 130 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 RNA5SP137-201ENST00000516833 135 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.01□□□□□ -2.25
IFT140Q96RY7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.01□□□□□ -2.25
IFT140Q96RY7 OR5AK1P-201ENST00000524837 922 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.01□□□□□ -2.25
IFT140Q96RY7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.01□□□□□ -2.25
IFT140Q96RY7 MTND4LP5-201ENST00000605152 292 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 AC022202.1-201ENST00000613515 211 ntBASIC1.01□□□□□ -2.25
IFT140Q96RY7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.01□□□□□ -2.25
IFT140Q96RY7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
IFT140Q96RY7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
IFT140Q96RY7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1□□□□□ -2.25
IFT140Q96RY7 NDUFB4P7-201ENST00000423198 363 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1□□□□□ -2.25
IFT140Q96RY7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1□□□□□ -2.25
IFT140Q96RY7 AP1S2P1-201ENST00000457344 379 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 RPS27P23-201ENST00000487608 251 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 RNU5A-7P-201ENST00000515979 116 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 RNA5SP165-201ENST00000517142 115 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1□□□□□ -2.25
IFT140Q96RY7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
IFT140Q96RY7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1□□□□□ -2.25
IFT140Q96RY7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1□□□□□ -2.25
IFT140Q96RY7 MIR3198-2-201ENST00000577868 80 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 AC013244.2-201ENST00000603396 103 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 AC016542.1-201ENST00000608259 493 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 AL356585.4-201ENST00000623078 1229 ntBASIC1□□□□□ -2.25
IFT140Q96RY7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1□□□□□ -2.25
IFT140Q96RY7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 SNORD51-201ENST00000384320 80 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 U6atac.2-201ENST00000408644 118 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 MTND1P33-201ENST00000446251 917 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 HMGB1P35-201ENST00000503360 598 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
IFT140Q96RY7 HIGD1AP6-201ENST00000521833 279 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 MIR4713-201ENST00000582691 75 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 AC080013.4-201ENST00000607624 649 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 FRG1HP-204ENST00000617940 757 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 MIR6130-201ENST00000619419 109 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 AC092608.3-201ENST00000625017 386 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 RNU5A-1-201ENST00000362698 116 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 AC096649.2-201ENST00000416186 393 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.99□□□□□ -2.25
IFT140Q96RY7 AC016925.2-201ENST00000605108 242 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 AL589743.7-201ENST00000612637 233 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 AC024595.1-201ENST00000623088 387 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 AC087821.2-201ENST00000637086 450 ntBASIC0.99□□□□□ -2.25
IFT140Q96RY7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms