Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS35Q96QK1 AC112191.3-201ENST00000604371 277 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 AL022161.1-201ENST00000604390 213 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 MIR15A-201ENST00000607334 83 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 AC069294.1-201ENST00000608397 350 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 AL449363.1-201ENST00000617815 186 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS35Q96QK1 AL109809.4-201ENST00000603520 2185 ntBASIC2.31□□□□□ -2.04
VPS35Q96QK1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VPS35Q96QK1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS35Q96QK1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS35Q96QK1 RNU6-898P-201ENST00000365627 104 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 RNU6-748P-201ENST00000384648 107 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 SNORA40C-201ENST00000391285 128 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 MRPL42P2-201ENST00000403169 426 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC007283.2-201ENST00000424739 197 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AL356583.2-201ENST00000426536 280 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC137499.1-201ENST00000427602 88 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 RNU7-125P-201ENST00000458760 62 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 MTCO2P29-201ENST00000465212 189 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC023194.1-201ENST00000493084 308 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC118465.1-201ENST00000513820 1271 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 RNA5SP112-201ENST00000515937 99 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 Y_RNA.689-201ENST00000516589 107 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC008015.1-201ENST00000555505 465 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 MIR5571-201ENST00000577998 113 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC009878.1-201ENST00000621819 340 ntBASIC2.3□□□□□ -2.04
VPS35Q96QK1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS35Q96QK1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS35Q96QK1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 RNU5E-1-201ENST00000362477 120 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 RNU6-486P-201ENST00000363116 107 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 Y_RNA.560-201ENST00000384689 102 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AL445529.1-201ENST00000398713 389 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 RNU4-53P-201ENST00000410828 140 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 RNU6-920P-201ENST00000410926 92 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AF274854.1-201ENST00000413236 615 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 BX276092.3-201ENST00000424182 230 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AL589872.1-201ENST00000426602 288 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 RPL23AP30-201ENST00000432419 501 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 IPO7P1-201ENST00000442031 636 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS35Q96QK1 BTF3P15-201ENST00000455606 336 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC080013.2-201ENST00000460866 323 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC004263.1-201ENST00000479327 332 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 RPS3AP22-201ENST00000488297 769 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC079804.2-201ENST00000490376 200 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC116655.1-201ENST00000508324 901 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC010486.1-201ENST00000511793 424 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 ACA59.2-201ENST00000517061 156 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 RNU6-232P-201ENST00000517144 64 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 OR5B19P-201ENST00000531766 928 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 LINC00933-203ENST00000559812 219 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 MTATP6P24-201ENST00000576835 677 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 MIR1273C-201ENST00000578669 77 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 HMGN1P30-201ENST00000589286 268 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC018638.7-201ENST00000605836 1114 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC079248.2-201ENST00000623779 326 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 AC099654.13-201ENST00000639774 207 ntBASIC2.29□□□□□ -2.04
VPS35Q96QK1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS35Q96QK1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
VPS35Q96QK1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
VPS35Q96QK1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
VPS35Q96QK1 AC073343.1-201ENST00000328239 651 ntBASIC2.28□□□□□ -2.04
VPS35Q96QK1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS35Q96QK1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS35Q96QK1 RNU6-395P-201ENST00000365662 106 ntBASIC2.28□□□□□ -2.04
VPS35Q96QK1 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
VPS35Q96QK1 RNU6-39P-201ENST00000384344 107 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms