Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 FTH1P9-201ENST00000513251 355 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 RNU6-470P-201ENST00000515954 104 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 RNA5SP384-201ENST00000516615 116 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 AC009902.1-201ENST00000519351 183 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 AP006245.1-201ENST00000522549 120 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 AL117187.1-201ENST00000555482 181 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 MIR548AC-201ENST00000585049 88 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 SNRPGP15-201ENST00000600149 222 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 AC098826.3-201ENST00000603823 466 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 AC011890.2-201ENST00000613393 294 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 7SK.10-201ENST00000621414 298 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 OR4G2P-202ENST00000641004 1759 ntBASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHAMP1Q96JM3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC004925.1-201ENST00000624256 2706 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 RNU6-1329P-201ENST00000365664 107 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AP002088.1-201ENST00000382740 395 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 RNU6-574P-201ENST00000384265 107 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 RNU6-842P-201ENST00000384269 107 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 RNY1P14-201ENST00000384426 108 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 RNU6-331P-201ENST00000384724 107 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 MIR124-3-201ENST00000384866 87 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 PTMAP5-201ENST00000393073 333 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC243428.1-201ENST00000421099 264 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 RPS24P6-201ENST00000452670 400 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 RPL21P11-201ENST00000461458 483 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC092451.1-201ENST00000480211 153 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AL049874.1-201ENST00000489560 388 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 SNORD84-203ENST00000584275 78 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC005344.1-201ENST00000613391 459 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AL121772.2-201ENST00000614331 297 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 AC010205.1-201ENST00000616668 449 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 BMS1P21-201ENST00000634565 365 ntBASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHAMP1Q96JM3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AC233263.6-201ENST00000631132 1963 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AL161912.2-201ENST00000565707 3007 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 MAPK10-372ENST00000641954 3413 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 DEFB108F-201ENST00000344638 222 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 RNA5SP124-201ENST00000362739 110 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 RNU6-1059P-201ENST00000363752 98 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 RNU6-512P-201ENST00000364438 103 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 HMGB1P9-201ENST00000429856 646 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 SNRPEP4-201ENST00000435815 279 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AC010285.1-201ENST00000470580 392 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AC008716.1-201ENST00000511084 513 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 RNU6-120P-201ENST00000516077 103 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 RNU1-86P-201ENST00000516108 154 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 RNU1-107P-201ENST00000516617 154 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 RNU6-699P-201ENST00000517081 110 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AL161798.1-201ENST00000604630 131 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AL132822.1-201ENST00000617063 513 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 MIR6852-201ENST00000621699 66 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AL360181.4-201ENST00000621752 134 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 AC119674.1-207ENST00000641355 633 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 ZNF807-201ENST00000328088 1707 ntBASIC4.24□□□□□ -1.73
CHAMP1Q96JM3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.23□□□□□ -1.73
CHAMP1Q96JM3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHAMP1Q96JM3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHAMP1Q96JM3 MIR30E-201ENST00000362104 92 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms