Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 AC012676.2-201ENST00000619258 186 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 MIR938-201ENST00000401216 83 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 RPS15AP27-201ENST00000449183 343 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 AL157398.1-201ENST00000452981 186 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 RPL23AP54-201ENST00000495129 419 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 AC138853.1-201ENST00000503549 823 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
SPG11Q96JI7 MIR4645-201ENST00000583158 77 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 AC073410.2-201ENST00000603240 332 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 AL450336.1-201ENST00000605180 586 ntBASIC0.28□□□□□ -2.36
SPG11Q96JI7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SPG11Q96JI7 Y_RNA.293-201ENST00000364908 93 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SPG11Q96JI7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 RPL23AP33-201ENST00000442301 452 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 RNU6-775P-201ENST00000459318 96 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 snoU13.21-201ENST00000459368 105 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AC093770.1-201ENST00000511559 571 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 MIR378F-201ENST00000578143 78 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 RNU6-220P-201ENST00000390919 107 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AL356131.1-201ENST00000405826 414 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 RNU2-64P-201ENST00000411315 191 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 AP1S2P1-201ENST00000457344 379 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AP001025.1-201ENST00000486139 332 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 RNU6-1004P-201ENST00000516584 111 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 AC074051.3-201ENST00000570238 358 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AC090666.1-201ENST00000578241 445 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SPG11Q96JI7 AL161423.1-201ENST00000613700 262 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AL355810.1-201ENST00000614629 552 ntBASIC0.27□□□□□ -2.37
SPG11Q96JI7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.27□□□□□ -2.37
SPG11Q96JI7 MIR214-201ENST00000385214 110 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 AL645638.1-201ENST00000440519 361 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 PRPS1P1-201ENST00000445305 876 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.26□□□□□ -2.37
SPG11Q96JI7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC025465.4-201ENST00000513422 638 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 MIR4667-201ENST00000578933 66 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 Z83818.1-201ENST00000603584 150 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC019131.2-201ENST00000609071 870 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC112487.2-201ENST00000637950 304 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC097463.2-201ENST00000421074 142 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.26□□□□□ -2.37
SPG11Q96JI7 RPL23AP6-201ENST00000446637 472 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.26□□□□□ -2.37
SPG11Q96JI7 RPL23AP3-201ENST00000453844 468 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 RNU7-193P-201ENST00000516723 65 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 RNU6-943P-201ENST00000516960 98 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.26□□□□□ -2.37
SPG11Q96JI7 HMGN2P15-201ENST00000585707 270 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 AL669831.4-202ENST00000590817 238 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 AC079395.3-201ENST00000615161 484 ntBASIC0.26□□□□□ -2.37
SPG11Q96JI7 MIR608-201ENST00000384820 100 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC098614.2-201ENST00000426040 255 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.25□□□□□ -2.37
SPG11Q96JI7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC107953.1-201ENST00000522216 297 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.25□□□□□ -2.37
SPG11Q96JI7 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.25□□□□□ -2.37
SPG11Q96JI7 AP001269.3-201ENST00000588718 329 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 HSPE1P19-201ENST00000603327 295 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC106900.2-201ENST00000604994 317 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AL161629.2-201ENST00000615347 275 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC087821.2-201ENST00000637086 450 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.25□□□□□ -2.37
SPG11Q96JI7 RNU6-833P-201ENST00000363486 107 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 SNORA4.1-201ENST00000364263 144 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
SPG11Q96JI7 OFD1P18Y-201ENST00000420889 959 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 NDUFB4P7-201ENST00000423198 363 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 ISCA1P1-201ENST00000426679 387 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AL354941.1-201ENST00000438600 464 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 AC087477.1-201ENST00000465747 340 ntBASIC0.25□□□□□ -2.37
SPG11Q96JI7 SYPL1P1-201ENST00000473622 768 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms