Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-443P-201ENST00000384780 107 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AL138827.1-201ENST00000402666 306 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 RNU6-1025P-201ENST00000410629 104 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AF274854.1-201ENST00000413236 615 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC114491.1-201ENST00000416095 246 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 MTND1P23-201ENST00000416931 372 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AL160275.3-201ENST00000423876 471 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 ISCA1P6-201ENST00000427740 390 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC133104.1-201ENST00000429100 218 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC112220.1-201ENST00000434628 355 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 KATNBL1P3-201ENST00000443475 909 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC090096.1-201ENST00000489168 390 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC116562.3-201ENST00000506136 177 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC091965.2-201ENST00000512324 613 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC025755.1-201ENST00000521306 278 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AP001646.1-201ENST00000527936 915 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC068587.5-201ENST00000528506 175 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC087241.2-201ENST00000535801 324 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC137800.2-201ENST00000574375 120 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC008521.1-201ENST00000587471 187 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 MIR92B-201ENST00000607575 96 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC005332.10-201ENST00000612725 619 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 AC110994.2-201ENST00000635481 492 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.02□□□□□ -2.09
RPUSD4Q96CM3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AL390237.1-201ENST00000404226 1415 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 RNU6-179P-201ENST00000363350 107 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 RNU6-461P-201ENST00000364195 107 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 Y_RNA.367-201ENST00000365544 101 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 RNU6-641P-201ENST00000384006 107 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 SNORA6-201ENST00000384033 151 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 SNORA75B-201ENST00000384053 137 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 SNORA18.3-201ENST00000384122 132 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 RNU1-52P-201ENST00000384190 164 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 SNORD116-1-201ENST00000384335 95 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 MIR454-201ENST00000390180 115 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 UBA52P6-201ENST00000399822 382 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 CALM2P2-201ENST00000428512 440 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AL139132.1-201ENST00000431587 344 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC087499.2-201ENST00000432861 149 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AL078601.1-201ENST00000444542 271 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC079448.1-201ENST00000449377 373 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 MTND1P27-201ENST00000451117 902 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 RNU6-956P-201ENST00000458868 103 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC105252.1-201ENST00000503089 286 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC026427.2-201ENST00000506228 536 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 RNU6-572P-201ENST00000516724 80 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 SNORA31.19-201ENST00000517079 126 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AP002963.1-201ENST00000530590 184 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 ADI1P3-201ENST00000549509 470 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 MIR4528-201ENST00000577763 90 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 MIR4782-201ENST00000577987 79 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 MIR4325-201ENST00000583049 90 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 MIR5195-201ENST00000583555 115 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 RPS15AP11-201ENST00000594193 385 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC068790.2-201ENST00000602601 557 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC007179.3-201ENST00000604976 235 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AL121992.2-201ENST00000606262 256 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC006566.1-201ENST00000608943 513 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 AC096577.2-201ENST00000611455 153 ntBASIC2.01□□□□□ -2.09
RPUSD4Q96CM3 uc_338.14-201ENST00000613162 166 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms