| CLUAP1 | Q96AJ1 | MIR4284-201 | ENST00000578924 | 81 nt | BASIC | 5.36 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | LINC01733-201 | ENST00000449316 | 4604 nt | TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | EYA4-202 | ENST00000355286 | 4317 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | CACNB4-233 | ENST00000636773 | 4143 nt | TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | PLCB4-206 | ENST00000414679 | 3947 nt | APPRIS ALT1 TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | U3.6-201 | ENST00000363622 | 211 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | CRP-203 | ENST00000368111 | 512 nt | TSL 3 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RNU6-1035P-201 | ENST00000384477 | 107 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MIR518D-201 | ENST00000385014 | 87 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | TRAJ6-201 | ENST00000390531 | 62 nt | APPRIS P1 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MIR1179-201 | ENST00000408703 | 91 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RN7SKP53-201 | ENST00000411337 | 315 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | LINC01341-201 | ENST00000419361 | 552 nt | TSL 2 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC092660.1-201 | ENST00000420648 | 371 nt | TSL 2 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RPL18P10-201 | ENST00000425606 | 538 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AL121760.1-201 | ENST00000447206 | 346 nt | TSL 2 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC010469.1-201 | ENST00000463864 | 576 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC109327.1-201 | ENST00000471666 | 403 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | ATP5J2-209 | ENST00000488775 | 306 nt | TSL 2 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RPL23AP49-201 | ENST00000492925 | 468 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | UBE2CP3-201 | ENST00000502715 | 450 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AMZ2P1-203 | ENST00000565833 | 850 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MYL12BP1-201 | ENST00000569826 | 507 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC104581.2-201 | ENST00000572227 | 430 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC100781.1-201 | ENST00000597142 | 383 nt | TSL 3 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RPS29P30-201 | ENST00000600975 | 111 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | SMAD5-AS1_4.1-201 | ENST00000615561 | 167 nt | BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | NAA50-211 | ENST00000630058 | 177 nt | TSL 5 BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC016687.3-202 | ENST00000505018 | 2404 nt | TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | SLC30A6-203 | ENST00000379343 | 2354 nt | TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | EMSY-215 | ENST00000533248 | 3798 nt | TSL 1 (best) BASIC | 5.35 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MTND5P7-201 | ENST00000413558 | 1798 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | EFHC1-205 | ENST00000538167 | 5308 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | ORC4-216 | ENST00000540442 | 6472 nt | TSL 2 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | ZFHX4-207 | ENST00000521891 | 14019 nt | APPRIS P2 TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | BBX-203 | ENST00000402543 | 3980 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | ARHGAP42-201 | ENST00000298815 | 4752 nt | APPRIS P1 TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | ARID2-205 | ENST00000444670 | 7316 nt | TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RNU6-238P-201 | ENST00000363313 | 106 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | SNORD74.4-201 | ENST00000364129 | 80 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | DEFB116-201 | ENST00000400549 | 309 nt | APPRIS P1 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AL591043.1-201 | ENST00000432461 | 424 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RPS3AP12-201 | ENST00000443616 | 753 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC105398.1-201 | ENST00000446073 | 402 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | CHEK2P4-201 | ENST00000450340 | 246 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC010974.1-201 | ENST00000450509 | 374 nt | TSL 3 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | RPL22P13-201 | ENST00000493291 | 347 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC087362.1-201 | ENST00000527912 | 434 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | SPTY2D1-AS1-203 | ENST00000542172 | 331 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | NUDT7-203 | ENST00000563839 | 316 nt | TSL 3 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MIR3138-201 | ENST00000585238 | 82 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC011477.3-201 | ENST00000585571 | 403 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | ARF4P1-201 | ENST00000605447 | 541 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | AC012603.1-201 | ENST00000606424 | 528 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MIR1244-1-201 | ENST00000612829 | 85 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MIR6134-201 | ENST00000617606 | 109 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MIR1244-3-201 | ENST00000635744 | 85 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MIR1244-2-201 | ENST00000636449 | 85 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | MIR1244-4-202 | ENST00000636813 | 85 nt | BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | SLC15A5-201 | ENST00000344941 | 2923 nt | APPRIS P1 TSL 5 BASIC | 5.34 | □□□□□ -1.55 | | |
| CLUAP1 | Q96AJ1 | CDH8-205 | ENST00000577730 | 8009 nt | TSL 5 BASIC | 5.34 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | GPRC6A-201 | ENST00000310357 | 2860 nt | APPRIS P1 TSL 1 (best) BASIC | 5.34 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | MCF2-201 | ENST00000338585 | 2826 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | C12orf45-204 | ENST00000552951 | 23529 nt | APPRIS P1 TSL 1 (best) BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | PTPN13-202 | ENST00000411767 | 8119 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | ZNF660-201 | ENST00000322734 | 5834 nt | APPRIS P1 TSL 2 BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | TJP1-204 | ENST00000400011 | 6764 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | FAM111B-202 | ENST00000411426 | 3344 nt | TSL 4 BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | MIR448-201 | ENST00000362131 | 111 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | RNU6-527P-201 | ENST00000363425 | 104 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.188-201 | ENST00000363952 | 111 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | Z98749.2-208 | ENST00000381646 | 500 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | SNORA37-201 | ENST00000384504 | 129 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | SNORA1.3-201 | ENST00000384676 | 136 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | RNU6-713P-201 | ENST00000384761 | 107 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | RNU6-1245P-201 | ENST00000411130 | 106 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | RPL23AP26-201 | ENST00000412728 | 464 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | FTH1P6-201 | ENST00000430768 | 320 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | AC007389.2-201 | ENST00000434630 | 306 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | AL451129.1-201 | ENST00000437471 | 285 nt | TSL 3 BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | AC098831.1-201 | ENST00000440661 | 216 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | SNRPGP5-201 | ENST00000456003 | 220 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | SLC25A15P5-201 | ENST00000508033 | 253 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | RNA5SP360-201 | ENST00000516555 | 118 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | RNU6-794P-201 | ENST00000517261 | 64 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | TRAPPC2P2-201 | ENST00000517589 | 409 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | AL163973.3-201 | ENST00000547093 | 430 nt | TSL 3 BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | AC022655.2-201 | ENST00000577280 | 318 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | MIR3668-201 | ENST00000582138 | 75 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | FAM27D1-201 | ENST00000612308 | 341 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | MIR7702-201 | ENST00000621931 | 59 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | AC048347.1-201 | ENST00000624621 | 427 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | PTGFR-203 | ENST00000370758 | 4337 nt | APPRIS P1 TSL 1 (best) BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | POU2F1-206 | ENST00000429375 | 13651 nt | APPRIS ALT2 TSL 2 BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | AC068254.2-201 | ENST00000623938 | 3577 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | AC006971.1-201 | ENST00000407916 | 4486 nt | BASIC | 5.33 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | CNTN6-205 | ENST00000446702 | 4513 nt | APPRIS P1 TSL 1 (best) BASIC | 5.32 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | RNA5SP515-201 | ENST00000364570 | 118 nt | BASIC | 5.32 | □□□□□ -1.56 | | |
| CLUAP1 | Q96AJ1 | RNA5SP366-201 | ENST00000365454 | 123 nt | BASIC | 5.32 | □□□□□ -1.56 | | |