Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC008749.1-201ENST00000597650 306 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC004853.1-201ENST00000604902 698 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC007349.4-201ENST00000608114 532 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 U8.3-201ENST00000363321 132 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 RNU6-884P-201ENST00000363889 107 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 RPS15AP5-201ENST00000436276 388 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 RPL7P55-201ENST00000450522 746 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 RPL23AP35-201ENST00000451906 501 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AL121769.1-201ENST00000469473 401 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC022880.1-201ENST00000534017 973 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AP002906.1-201ENST00000603405 233 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 AC025588.2-201ENST00000604851 466 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 MTND1P37-201ENST00000636562 264 ntBASIC1.5□□□□□ -2.17
TOPBP1Q92547 MIR16-2-201ENST00000362117 81 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
TOPBP1Q92547 RNU6-549P-201ENST00000384433 107 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 MIR218-1-201ENST00000384999 110 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 MTATP6P27-201ENST00000416987 621 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.49□□□□□ -2.17
TOPBP1Q92547 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.49□□□□□ -2.17
TOPBP1Q92547 FAM204CP-201ENST00000424489 642 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.49□□□□□ -2.17
TOPBP1Q92547 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.49□□□□□ -2.17
TOPBP1Q92547 AC112518.2-201ENST00000508565 425 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 MRPS33P3-201ENST00000513456 322 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 RNU7-193P-201ENST00000516723 65 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.49□□□□□ -2.17
TOPBP1Q92547 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.49□□□□□ -2.17
TOPBP1Q92547 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.49□□□□□ -2.17
TOPBP1Q92547 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 AL109918.3-201ENST00000603072 338 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.49□□□□□ -2.17
TOPBP1Q92547 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.49□□□□□ -2.17
TOPBP1Q92547 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TOPBP1Q92547 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.48□□□□□ -2.17
TOPBP1Q92547 U6.112-201ENST00000384129 70 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 MIR888-201ENST00000401186 77 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 CIR1P3-201ENST00000405137 479 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 RN7SKP158-201ENST00000410453 326 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 RNU2-49P-201ENST00000410666 184 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.48□□□□□ -2.17
TOPBP1Q92547 ZNF863P-201ENST00000426746 417 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 MED14P1-201ENST00000430517 648 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 SNORD97-201ENST00000459187 142 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 RNU6-775P-201ENST00000459318 96 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 AC005908.1-201ENST00000468701 347 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 RPS27AP10-201ENST00000496103 208 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.48□□□□□ -2.17
TOPBP1Q92547 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 RNA5SP291-201ENST00000517222 105 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 AC118273.2-201ENST00000532092 465 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.48□□□□□ -2.17
TOPBP1Q92547 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.48□□□□□ -2.17
TOPBP1Q92547 ZNF92P2-201ENST00000600543 1059 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 AC025165.5-201ENST00000602802 578 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 AL021997.1-201ENST00000605757 193 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 AL158211.4-201ENST00000606988 584 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 AC091812.1-201ENST00000432235 1948 ntBASIC1.48□□□□□ -2.17
TOPBP1Q92547 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
TOPBP1Q92547 SNORA16B-201ENST00000364674 135 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
TOPBP1Q92547 RNU6-1300P-201ENST00000391046 108 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 AL109755.1-201ENST00000401791 649 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.47□□□□□ -2.17
TOPBP1Q92547 DEFB130D-201ENST00000426866 237 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 AC007919.1-201ENST00000429380 217 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 AC004383.1-201ENST00000438135 289 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.47□□□□□ -2.17
TOPBP1Q92547 OFD1P3Y-201ENST00000453312 783 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 RPL26P9-201ENST00000457466 433 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 KLF3P2-201ENST00000465138 268 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.47□□□□□ -2.17
TOPBP1Q92547 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.47□□□□□ -2.17
TOPBP1Q92547 RNU6-751P-201ENST00000516382 101 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 SNORA48.9-201ENST00000516419 162 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
TOPBP1Q92547 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TOPBP1Q92547 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.47□□□□□ -2.17
TOPBP1Q92547 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.47□□□□□ -2.17
TOPBP1Q92547 AC011451.2-201ENST00000604303 598 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 AL159972.1-201ENST00000625150 448 ntBASIC1.47□□□□□ -2.17
TOPBP1Q92547 RNA5SP125-201ENST00000364843 120 ntBASIC1.46□□□□□ -2.18
TOPBP1Q92547 SUGT1P1-201ENST00000379514 476 ntBASIC1.46□□□□□ -2.18
TOPBP1Q92547 RNU6-741P-201ENST00000383889 107 ntBASIC1.46□□□□□ -2.18
TOPBP1Q92547 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 BPY2DP-201ENST00000422208 265 ntBASIC1.46□□□□□ -2.18
TOPBP1Q92547 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 DUXAP8-207ENST00000456786 622 ntBASIC1.46□□□□□ -2.18
TOPBP1Q92547 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.46□□□□□ -2.18
TOPBP1Q92547 MIR4789-201ENST00000577469 82 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms