Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL589880.1-201ENST00000448271 287 ntBASIC0.35□□□□□ -2.35
ALMS1Q8TCU4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.35□□□□□ -2.35
ALMS1Q8TCU4 AC118282.2-201ENST00000508739 374 ntBASIC0.35□□□□□ -2.35
ALMS1Q8TCU4 AC022447.1-201ENST00000515358 464 ntBASIC0.35□□□□□ -2.35
ALMS1Q8TCU4 AC005021.1-201ENST00000608730 355 ntBASIC0.35□□□□□ -2.35
ALMS1Q8TCU4 RNU6-697P-201ENST00000363348 107 ntBASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 SNORA29-201ENST00000384183 140 ntBASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 AC092628.1-201ENST00000436250 252 ntBASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 CYP2C61P-201ENST00000604072 290 ntBASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 AP003399.1-201ENST00000637534 361 ntBASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
ALMS1Q8TCU4 RNU6-338P-201ENST00000383888 105 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AC006548.1-201ENST00000427470 102 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 RNU6-420P-201ENST00000458780 107 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 RNA5SP165-201ENST00000517142 115 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 CR381572.1-201ENST00000625098 102 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 SNORD65-201ENST00000391079 73 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AL136372.1-201ENST00000403060 228 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 PIGFP2-201ENST00000421400 651 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AC068276.1-201ENST00000605793 379 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AC013468.1-201ENST00000608680 598 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 U4atac.1-201ENST00000618345 95 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 AL136313.1-201ENST00000624804 202 ntBASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.36
ALMS1Q8TCU4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 RNU6-968P-201ENST00000384076 107 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 OR6C72P-201ENST00000451403 892 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 snoU13.7-201ENST00000459220 104 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC092470.1-201ENST00000546187 132 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC004817.2-201ENST00000561794 651 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AP006248.3-201ENST00000623580 594 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 RNU6-48P-201ENST00000384161 107 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC010615.3-201ENST00000597319 394 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC008945.2-201ENST00000606056 604 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 SNORA4.3-201ENST00000365564 137 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 VN1R42P-201ENST00000424651 344 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 RNF138P1-201ENST00000502765 546 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC109927.2-201ENST00000506416 303 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC136628.3-201ENST00000521868 290 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC090666.1-201ENST00000578241 445 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 MIR5589-201ENST00000579442 60 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC013244.3-201ENST00000605614 388 ntBASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.33□□□□□ -2.36
ALMS1Q8TCU4 SNORA8.3-201ENST00000384679 139 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 MTND4P16-201ENST00000466108 1367 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 AC073614.1-201ENST00000438690 650 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 AP002371.1-201ENST00000463604 433 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 AC073308.1-201ENST00000623696 305 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 RNU4-67P-201ENST00000364569 141 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 MTCO1P56-201ENST00000401674 224 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 AP003327.1-201ENST00000529684 127 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 AC012435.1-202ENST00000568772 240 ntBASIC0.32□□□□□ -2.36
ALMS1Q8TCU4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 Z82190.1-201ENST00000454534 490 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 MTND1P16-201ENST00000465177 898 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 POLR2KP1-201ENST00000553226 168 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 MIR548Y-201ENST00000582739 110 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 AC115085.1-201ENST00000588924 229 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 MTCYBP22-201ENST00000603788 447 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 MTCO1P23-201ENST00000415223 1526 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 RPS24P7-201ENST00000416921 246 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 RNU6-989P-201ENST00000362756 107 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 Y_RNA.132-201ENST00000363421 102 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 RNY3-201ENST00000365484 102 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 MIR518A2-201ENST00000384966 87 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 AL117342.1-201ENST00000404861 406 ntBASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.31□□□□□ -2.36
ALMS1Q8TCU4 RPL31P3-201ENST00000458430 332 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms