Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
RTL9Q8NET4 AC110491.1-201ENST00000562191 2010 ntBASIC1.22□□□□□ -2.21
RTL9Q8NET4 AL359854.1-201ENST00000614203 1594 ntBASIC1.22□□□□□ -2.21
RTL9Q8NET4 RNU6-486P-201ENST00000363116 107 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 SNORD14B-201ENST00000364533 90 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 RNU2-33P-201ENST00000410344 192 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.21□□□□□ -2.21
RTL9Q8NET4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.21□□□□□ -2.21
RTL9Q8NET4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.21□□□□□ -2.21
RTL9Q8NET4 AC098831.1-201ENST00000440661 216 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 MTND6P13-201ENST00000443510 523 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 RPS27P1-201ENST00000450552 247 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.21□□□□□ -2.21
RTL9Q8NET4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.21□□□□□ -2.21
RTL9Q8NET4 AC135279.1-201ENST00000543493 504 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 AC012435.1-202ENST00000568772 240 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.21□□□□□ -2.21
RTL9Q8NET4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.21□□□□□ -2.21
RTL9Q8NET4 AC004009.2-201ENST00000623016 728 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 AC080188.3-201ENST00000624842 748 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 AL159972.1-201ENST00000625150 448 ntBASIC1.21□□□□□ -2.21
RTL9Q8NET4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.21□□□□□ -2.22
RTL9Q8NET4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTL9Q8NET4 RNU6-657P-201ENST00000383904 107 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 NDUFS5P1-201ENST00000405668 289 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.21□□□□□ -2.22
RTL9Q8NET4 RPS27AP10-201ENST00000496103 208 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 HMGB1P35-201ENST00000503360 598 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RTL9Q8NET4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.21□□□□□ -2.22
RTL9Q8NET4 AC118282.2-201ENST00000508739 374 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 RNA5SP112-201ENST00000515937 99 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 AC103833.1-201ENST00000517442 172 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 NACAP3-201ENST00000552100 481 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 AL731537.2-201ENST00000561565 951 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.21□□□□□ -2.22
RTL9Q8NET4 BNIP3P24-201ENST00000593398 557 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 AC005261.5-201ENST00000596280 355 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 AC004853.1-201ENST00000604902 698 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 uc_338.14-201ENST00000613162 166 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 AC024581.2-201ENST00000619986 252 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 AC007490.1-201ENST00000624321 703 ntBASIC1.21□□□□□ -2.22
RTL9Q8NET4 DBF4P1-201ENST00000412976 1892 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RTL9Q8NET4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RTL9Q8NET4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RTL9Q8NET4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 RNU1-133P-201ENST00000364867 167 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 MTCO2P31-201ENST00000402702 684 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 AL133264.1-201ENST00000407157 562 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 NDUFS5P4-201ENST00000412983 318 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 FAM204CP-201ENST00000424489 642 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 MTND2P5-201ENST00000432656 1006 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.2□□□□□ -2.22
RTL9Q8NET4 MTND4LP16-201ENST00000440828 295 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 AC002381.1-201ENST00000447049 280 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 VN1R10P-201ENST00000447106 875 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.2□□□□□ -2.22
RTL9Q8NET4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.2□□□□□ -2.22
RTL9Q8NET4 AL096803.2-201ENST00000450032 677 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.2□□□□□ -2.22
RTL9Q8NET4 RNU6-362P-201ENST00000516736 90 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 SNORA44.1-201ENST00000517031 108 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 CYP3A137P-201ENST00000562436 69 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 AC233702.2-202ENST00000562547 291 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 MIR6857-201ENST00000613267 93 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 AC009233.1-201ENST00000616477 371 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 MIR5739-201ENST00000619803 80 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 U6.101-201ENST00000637707 76 ntBASIC1.2□□□□□ -2.22
RTL9Q8NET4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RTL9Q8NET4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 RNU6-516P-201ENST00000411381 104 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 RAC1P8-201ENST00000427086 527 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 AC007395.1-201ENST00000451333 677 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 SNORA4.4-201ENST00000515921 135 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 HSPE1P4-201ENST00000550617 308 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.19□□□□□ -2.22
RTL9Q8NET4 AP003973.1-201ENST00000604639 691 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 AC013476.2-201ENST00000614456 459 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 AC006213.5-201ENST00000619673 288 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 MIR4275-201ENST00000636486 87 ntBASIC1.19□□□□□ -2.22
RTL9Q8NET4 RNA5SP240-201ENST00000365355 128 ntBASIC1.18□□□□□ -2.22
RTL9Q8NET4 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
RTL9Q8NET4 RPL21P90-201ENST00000415692 466 ntBASIC1.18□□□□□ -2.22
RTL9Q8NET4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.18□□□□□ -2.22
RTL9Q8NET4 MTCO3P1-205ENST00000422088 832 ntBASIC1.18□□□□□ -2.22
RTL9Q8NET4 AL590623.1-201ENST00000427864 105 ntBASIC1.18□□□□□ -2.22
RTL9Q8NET4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.18□□□□□ -2.22
RTL9Q8NET4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms