Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC104389.3-201ENST00000445629 235 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC079448.1-201ENST00000449377 373 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 TRBV1-201ENST00000476502 284 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC004924.1-201ENST00000480160 781 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 GZMAP1-201ENST00000503054 631 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC021739.1-201ENST00000559631 174 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC137800.2-201ENST00000574375 120 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 MIR3167-201ENST00000579623 85 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC023043.3-201ENST00000593113 385 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AL391813.1-201ENST00000603098 260 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC073648.5-201ENST00000603502 305 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 BNIP3P9-201ENST00000603714 553 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC004492.1-201ENST00000607036 742 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AC072046.2-201ENST00000618366 268 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 AL589994.2-201ENST00000621124 579 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 MTND4P5-201ENST00000435821 1374 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 MAPK10-266ENST00000641066 6555 ntBASIC2.69□□□□□ -1.98
RTL3Q8N8U3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RTL3Q8N8U3 NACAP2-201ENST00000318548 624 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 RNY4P34-201ENST00000364779 95 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 RNU2-8P-201ENST00000410727 190 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 ARL5AP4-201ENST00000430731 512 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC104850.1-201ENST00000435940 476 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC108938.1-201ENST00000451204 136 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC010587.1-201ENST00000505809 469 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC098799.2-201ENST00000509466 868 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 SNORD19.2-201ENST00000516978 73 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC109329.2-201ENST00000519658 482 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AP003392.2-201ENST00000527269 208 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC104763.2-201ENST00000604179 382 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AC103710.2-201ENST00000609912 942 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AL449363.1-201ENST00000617815 186 ntBASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTL3Q8N8U3 AL365361.1-201ENST00000566942 3481 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 MTND4P35-201ENST00000604257 1375 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RNU6-511P-201ENST00000363496 107 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RNY4P16-201ENST00000364768 94 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RNU5A-6P-201ENST00000384136 116 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RNU6-1103P-201ENST00000384150 107 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AL139039.1-201ENST00000401900 692 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 PIGFP2-201ENST00000421400 651 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RPL36AP6-201ENST00000435770 321 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 HMGN2P10-201ENST00000448085 265 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AL109933.2-201ENST00000452651 260 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 GSTA11P-201ENST00000452866 669 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 CACYBPP2-201ENST00000453625 678 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RPL9P33-201ENST00000484311 566 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RPL39P36-201ENST00000490784 156 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC108078.1-201ENST00000508073 725 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RNU6-703P-201ENST00000516946 107 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 RNA5SP337-201ENST00000517007 109 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 BTF3P12-201ENST00000519620 469 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC245014.2-201ENST00000603689 287 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AL022154.1-201ENST00000604698 785 ntBASIC2.67□□□□□ -1.98
RTL3Q8N8U3 AC246785.4-201ENST00000605374 287 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms