Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL137161.1-201ENST00000532231 390 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.99□□□□□ -1.77
SYNE4Q8N205 MIR4680-201ENST00000580906 66 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC006006.1-201ENST00000603082 144 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC006254.3-201ENST00000603353 884 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC005014.2-201ENST00000607795 599 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 AL157817.1-201ENST00000614264 790 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 AL450472.3-201ENST00000615578 367 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SYNE4Q8N205 AC121333.1-201ENST00000567488 2709 ntBASIC3.99□□□□□ -1.77
SYNE4Q8N205 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SYNE4Q8N205 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SYNE4Q8N205 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 MIR30E-201ENST00000362104 92 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 RNU6-1155P-201ENST00000363554 107 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 Y_RNA.212-201ENST00000364177 102 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 Y_RNA.473-201ENST00000384333 102 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 RNU6-310P-201ENST00000384655 107 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 MIR135A2-201ENST00000384854 100 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 RNU6-550P-201ENST00000391057 101 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 MIR548F4-201ENST00000408515 105 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 Y_RNA.646-201ENST00000410980 101 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 POLHP1-201ENST00000411806 470 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 RPS12P24-201ENST00000412619 387 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 RPL7P46-201ENST00000425129 740 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 MTND1P17-201ENST00000448961 204 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 AL645939.1-201ENST00000453429 797 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC135721.1-201ENST00000497954 479 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 RN7SKP295-201ENST00000517264 153 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 IMMP1LP2-201ENST00000552954 492 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 OR11H5P-201ENST00000554039 926 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC124312.5-201ENST00000604451 268 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC012443.1-201ENST00000605605 231 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 FAM157A-202ENST00000615155 405 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC004825.2-201ENST00000616634 455 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AC103858.2-201ENST00000621471 543 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 AL078596.1-201ENST00000624856 447 ntBASIC3.98□□□□□ -1.77
SYNE4Q8N205 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SYNE4Q8N205 MAPK10-373ENST00000641983 6772 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SYNE4Q8N205 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNE4Q8N205 FAM35DP-201ENST00000323387 2712 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 RNU6-1115P-201ENST00000362490 106 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 Y_RNA.112-201ENST00000363250 102 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 MIR124-3-201ENST00000384866 87 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 RNU6-278P-201ENST00000390945 109 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 MIR1261-201ENST00000408659 82 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 RNU6-516P-201ENST00000411381 104 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC108059.2-201ENST00000434626 151 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 GAPDHP27-201ENST00000447427 1020 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 RPS15AP27-201ENST00000449183 343 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SYNE4Q8N205 RPS27P27-201ENST00000498779 255 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC104806.1-201ENST00000508720 308 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC098591.2-201ENST00000510152 315 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC107934.2-201ENST00000518653 310 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 AP003122.3-201ENST00000526316 255 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 AL117187.1-201ENST00000555482 181 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC138761.3-201ENST00000579993 334 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 uc_338.25-201ENST00000613756 156 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC007485.1-201ENST00000616755 206 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 AC087588.2-201ENST00000617667 426 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 SNORD39.4-201ENST00000620099 78 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 U6.114-201ENST00000636407 96 ntBASIC3.97□□□□□ -1.77
SYNE4Q8N205 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SYNE4Q8N205 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SYNE4Q8N205 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
SYNE4Q8N205 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
SYNE4Q8N205 SNORD113-7-201ENST00000363762 77 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 Y_RNA.193-201ENST00000363979 102 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 RNU6-1127P-201ENST00000384580 107 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 RNA5SP239-201ENST00000410218 129 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 RPL30P2-201ENST00000414021 291 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.96□□□□□ -1.78
SYNE4Q8N205 SSXP9-201ENST00000417503 292 ntBASIC3.96□□□□□ -1.78
SYNE4Q8N205 RPL23AP82-202ENST00000427528 469 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms