Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 RNU6-879P-201ENST00000364328 108 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 RNU6-318P-201ENST00000384283 103 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 SNORA70C-201ENST00000384538 135 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 RNA5SP397-201ENST00000391323 118 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 RNU6-1135P-201ENST00000411083 103 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 AC104333.2-201ENST00000422630 192 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 AC005002.2-201ENST00000438228 269 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 RPS15AP7-201ENST00000439294 405 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 AL132838.2-201ENST00000492041 314 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 MIR2116-201ENST00000517221 80 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 AP004607.1-201ENST00000524456 203 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 CYCSP39-201ENST00000565821 309 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 MIR3138-201ENST00000585238 82 ntBASIC5.06□□□□□ -1.6
RNF135Q8IUD6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF135Q8IUD6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 Y_RNA.418-201ENST00000384029 102 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 RNU6-1035P-201ENST00000384477 107 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 Y_RNA.504-201ENST00000384481 104 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 MIR32-201ENST00000384965 70 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 RNU6-918P-201ENST00000391219 106 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 EIF1AXP1-201ENST00000419267 435 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AC011742.1-201ENST00000431448 434 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 RPS29P9-201ENST00000440360 171 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AL450023.3-201ENST00000440592 271 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 HMGN2P21-201ENST00000447764 270 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AL162591.2-201ENST00000449634 317 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AL451050.1-201ENST00000450126 415 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 RPL30P1-201ENST00000488676 339 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 UBE2CP3-201ENST00000502715 450 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 RNU6-703P-201ENST00000516946 107 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AC107016.1-201ENST00000550463 337 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AC027288.2-201ENST00000553028 243 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AC005255.1-201ENST00000593748 216 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 AL162424.1-201ENST00000602325 221 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 SNORD113-5-201ENST00000607261 78 ntBASIC5.05□□□□□ -1.6
RNF135Q8IUD6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF135Q8IUD6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 SNORA7.2-201ENST00000364446 145 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 RNU6-326P-201ENST00000365480 107 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 SNORD20-201ENST00000384550 80 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 MIR153-2-201ENST00000385225 87 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 RNU1-139P-201ENST00000391307 165 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 RPS4XP3-201ENST00000398541 413 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 UBA52P6-201ENST00000399822 382 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 RNA5SP44-201ENST00000410446 133 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AP000870.1-201ENST00000472927 406 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AC074133.1-201ENST00000515696 183 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 RNA5SP392-201ENST00000516905 112 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AC011921.3-201ENST00000605540 361 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AC037487.3-201ENST00000606668 112 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AC108706.1-201ENST00000611053 297 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AL365222.1-201ENST00000614661 98 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 AC019206.1-201ENST00000621938 425 ntBASIC5.04□□□□□ -1.6
RNF135Q8IUD6 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms