Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC002064.3-201ENST00000623448 346 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 AC084035.1-201ENST00000634543 607 ntBASIC2.84□□□□□ -1.95
LDB1Q86U70 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.84□□□□□ -1.95
LDB1Q86U70 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.84□□□□□ -1.96
LDB1Q86U70 ADAM3A-203ENST00000461344 2157 ntBASIC2.84□□□□□ -1.96
LDB1Q86U70 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LDB1Q86U70 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
LDB1Q86U70 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LDB1Q86U70 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LDB1Q86U70 RNU6-996P-201ENST00000365438 107 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 SNORA75B-201ENST00000384053 137 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 RNU6-517P-201ENST00000384362 110 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 SNORA48.2-201ENST00000390926 124 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 RNU6-750P-201ENST00000390946 107 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 RNU6-1158P-201ENST00000391167 107 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LDB1Q86U70 AL591416.1-201ENST00000404015 867 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 RNU2-49P-201ENST00000410666 184 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 RNU6-193P-201ENST00000410977 107 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 EEF1A1P41-201ENST00000414667 207 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 AC096649.2-201ENST00000416186 393 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LDB1Q86U70 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.83□□□□□ -1.96
LDB1Q86U70 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB1Q86U70 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.83□□□□□ -1.96
LDB1Q86U70 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.83□□□□□ -1.96
LDB1Q86U70 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB1Q86U70 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB1Q86U70 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.83□□□□□ -1.96
LDB1Q86U70 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.83□□□□□ -1.96
LDB1Q86U70 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.83□□□□□ -1.96
LDB1Q86U70 AC008716.1-201ENST00000511084 513 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 AC112206.3-201ENST00000514578 389 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 RN7SKP219-201ENST00000516825 296 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.83□□□□□ -1.96
LDB1Q86U70 CYCSP39-201ENST00000565821 309 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.83□□□□□ -1.96
LDB1Q86U70 AC008739.2-201ENST00000597006 317 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB1Q86U70 UCA1.1-201ENST00000620952 75 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LDB1Q86U70 AC092593.1-201ENST00000515413 1815 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 ASNSP3-201ENST00000451989 1306 ntBASIC2.83□□□□□ -1.96
LDB1Q86U70 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LDB1Q86U70 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDB1Q86U70 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDB1Q86U70 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LDB1Q86U70 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDB1Q86U70 AL139276.1-201ENST00000311910 1001 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 RNU6-1085P-201ENST00000363576 107 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 RNU6-1322P-201ENST00000364309 107 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 RNU1-140P-201ENST00000365040 165 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 Z98749.2-208ENST00000381646 500 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 Y_RNA.409-201ENST00000383990 98 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 SNORA18.3-201ENST00000384122 132 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 MIR578-201ENST00000384828 96 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 MIR1289-1-201ENST00000408836 144 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 RPL21P90-201ENST00000415692 466 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC093151.1-201ENST00000427711 313 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 MTND3P21-201ENST00000433774 331 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AL606489.2-201ENST00000433886 234 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 MTND1P34-201ENST00000438556 671 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB1Q86U70 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB1Q86U70 RPS15AP27-201ENST00000449183 343 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AL118520.1-201ENST00000450770 291 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 NIPA2P5-201ENST00000452282 464 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC003982.1-202ENST00000469928 248 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC082651.2-201ENST00000496833 166 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC091826.1-201ENST00000514065 313 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB1Q86U70 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB1Q86U70 RNU6-506P-201ENST00000516553 94 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AP005435.4-201ENST00000529514 284 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC104383.1-201ENST00000530297 370 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB1Q86U70 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB1Q86U70 MTATP6P3-201ENST00000581686 676 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB1Q86U70 AC078899.3-201ENST00000599065 212 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AL645944.1-201ENST00000603857 493 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AL035413.2-201ENST00000604801 525 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC090115.4-201ENST00000609970 188 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AL354950.2-201ENST00000617939 290 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB1Q86U70 AC068792.1-201ENST00000621354 417 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC090617.7-201ENST00000623952 126 ntBASIC2.82□□□□□ -1.96
LDB1Q86U70 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB1Q86U70 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDB1Q86U70 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LDB1Q86U70 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB1Q86U70 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB1Q86U70 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDB1Q86U70 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LDB1Q86U70 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LDB1Q86U70 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LDB1Q86U70 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LDB1Q86U70 Y_RNA.3-201ENST00000362331 103 ntBASIC2.81□□□□□ -1.96
LDB1Q86U70 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms