Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC092593.1-201ENST00000515413 1815 ntBASIC3.74□□□□□ -1.81
KRT28Q7Z3Y7 MTND4P14-201ENST00000435799 1354 ntBASIC3.74□□□□□ -1.81
KRT28Q7Z3Y7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
KRT28Q7Z3Y7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 GABRG2-229ENST00000641017 3628 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 RNU6-14P-201ENST00000384630 106 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 RNU6-817P-201ENST00000391083 104 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 RNU2-29P-201ENST00000410423 189 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC007919.1-201ENST00000429380 217 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 MTCO2P3-201ENST00000442543 421 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 DPPA3P1-201ENST00000448050 469 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC073415.1-201ENST00000449240 153 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 SNRPGP3-201ENST00000469405 227 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 RPS23P3-201ENST00000470993 430 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 RBBP4P6-201ENST00000508098 202 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 Y_RNA.676-201ENST00000516393 96 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC008945.2-201ENST00000606056 604 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 DISC2.1-201ENST00000612827 205 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC012409.4-201ENST00000612923 249 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AL359547.2-201ENST00000615810 418 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC024940.5-201ENST00000622889 474 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 MIR3662-201ENST00000637030 95 ntBASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRT28Q7Z3Y7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 USP9YP6-201ENST00000413550 854 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 CALM2P2-201ENST00000428512 440 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AL591212.2-201ENST00000433923 257 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 WASF1P1-201ENST00000447560 1131 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC092436.1-201ENST00000506450 503 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 SNORA31.3-201ENST00000516029 96 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 RN7SKP219-201ENST00000516825 296 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 RNA5SP291-201ENST00000517222 105 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC093331.1-201ENST00000521474 169 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 HIF1AP1-201ENST00000553642 175 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 MIR4703-201ENST00000577728 79 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC034102.8-201ENST00000615146 484 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AC006111.3-201ENST00000622137 383 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 MTND5P42-201ENST00000637720 498 ntBASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.72□□□□□ -1.81
KRT28Q7Z3Y7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 UBE2L2-201ENST00000254302 429 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AL139276.1-201ENST00000311910 1001 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 RNY3P3-201ENST00000363816 102 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 FGF7P8-201ENST00000402994 292 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 RPS12P24-201ENST00000412619 387 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC092809.3-201ENST00000415453 231 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AL109913.1-201ENST00000421173 514 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 MTCO3P18-201ENST00000440206 761 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AL353572.1-201ENST00000442490 417 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC009237.8-201ENST00000445492 379 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 CBWD4P-201ENST00000445695 655 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 SNRPFP3-201ENST00000457792 225 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC087588.1-201ENST00000462203 316 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC116353.2-201ENST00000505332 712 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 SNORA64.4-201ENST00000516632 81 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC008521.1-201ENST00000587471 187 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC022893.3-201ENST00000607665 437 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AL020991.1-201ENST00000612314 373 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 AC090132.2-201ENST00000615881 347 ntBASIC3.71□□□□□ -1.82
KRT28Q7Z3Y7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms