Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.56□□□□□ -2.32
UBR3Q6ZT12 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.56□□□□□ -2.32
UBR3Q6ZT12 MIR4653-201ENST00000585107 83 ntBASIC0.56□□□□□ -2.32
UBR3Q6ZT12 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
UBR3Q6ZT12 RNU6-1226P-201ENST00000384317 107 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AC009310.1-201ENST00000414414 451 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AL606490.4-201ENST00000423117 127 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 NDUFB4P7-201ENST00000423198 363 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 RPS27P16-201ENST00000425758 201 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AP001025.1-201ENST00000486139 332 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AC138853.1-201ENST00000503549 823 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AC104057.1-201ENST00000515547 497 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 RNU6-322P-201ENST00000516010 103 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 POLR2KP1-201ENST00000553226 168 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.55□□□□□ -2.32
UBR3Q6ZT12 MTND4LP5-201ENST00000605152 292 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AC069294.1-201ENST00000608397 350 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AC110792.4-201ENST00000609843 298 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AC012676.2-201ENST00000619258 186 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 AL121890.5-201ENST00000620848 304 ntBASIC0.55□□□□□ -2.32
UBR3Q6ZT12 RNU6-1083P-201ENST00000384022 107 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 U6atac.2-201ENST00000408644 118 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 AC134050.1-201ENST00000495088 933 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 SNORA62.5-201ENST00000516634 120 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 AL121652.1-201ENST00000608851 448 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 MTND4P8-201ENST00000514997 1362 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 RPS24P7-201ENST00000416921 246 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 AC111193.1-201ENST00000504097 155 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 RNA5SP112-201ENST00000515937 99 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.54□□□□□ -2.32
UBR3Q6ZT12 MIR4504-201ENST00000577413 92 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.54□□□□□ -2.32
UBR3Q6ZT12 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
UBR3Q6ZT12 Y_RNA.67-201ENST00000362870 100 ntBASIC0.53□□□□□ -2.32
UBR3Q6ZT12 RNU6-730P-201ENST00000383954 104 ntBASIC0.53□□□□□ -2.32
UBR3Q6ZT12 PIGPP2-201ENST00000411569 458 ntBASIC0.53□□□□□ -2.32
UBR3Q6ZT12 ARPC3P5-201ENST00000448802 534 ntBASIC0.53□□□□□ -2.32
UBR3Q6ZT12 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.53□□□□□ -2.32
UBR3Q6ZT12 RPL31P53-201ENST00000457065 348 ntBASIC0.53□□□□□ -2.32
UBR3Q6ZT12 AC099513.1-201ENST00000490423 301 ntBASIC0.53□□□□□ -2.32
UBR3Q6ZT12 AC005021.1-201ENST00000608730 355 ntBASIC0.53□□□□□ -2.32
UBR3Q6ZT12 RNU6-98P-201ENST00000384173 107 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 PIGFP2-201ENST00000421400 651 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AC073614.1-201ENST00000438690 650 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 RPS20P24-201ENST00000457473 361 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 RNA5SP395-201ENST00000516567 118 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 HMGN1P30-201ENST00000589286 268 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AC012669.1-201ENST00000603209 283 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AC022202.1-201ENST00000613515 211 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AC090116.1-201ENST00000615679 446 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AC073308.1-201ENST00000623696 305 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 RNU6-1164P-201ENST00000364428 107 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 MIR518A2-201ENST00000384966 87 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 MIR1283-2-201ENST00000408621 87 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 RPL31P35-201ENST00000431058 377 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 DUXAP1-201ENST00000556632 463 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 MIR4514-201ENST00000581410 57 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AL391597.1-201ENST00000618707 694 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
UBR3Q6ZT12 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.52□□□□□ -2.33
UBR3Q6ZT12 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.51□□□□□ -2.33
UBR3Q6ZT12 AC005832.2-201ENST00000538921 1430 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 RNU1-124P-201ENST00000363861 145 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 Y_RNA.294-201ENST00000364916 102 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 MIR100-201ENST00000385259 80 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 AL591704.1-201ENST00000432574 275 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 MTND4LP10-201ENST00000435146 291 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 RSU1P2-202ENST00000437884 485 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.51□□□□□ -2.33
UBR3Q6ZT12 RPL30P7-201ENST00000479312 323 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 SNORA31.6-201ENST00000516241 130 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 RNA5SP337-201ENST00000517007 109 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.51□□□□□ -2.33
UBR3Q6ZT12 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.51□□□□□ -2.33
UBR3Q6ZT12 AC010620.1-201ENST00000601088 1102 ntBASIC0.51□□□□□ -2.33
UBR3Q6ZT12 MTCYBP22-201ENST00000603788 447 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms