Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC109446.1-201ENST00000566172 220 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 CPDP1-201ENST00000579660 283 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AC018889.1-201ENST00000605372 397 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AC006157.1-201ENST00000611750 366 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 Z69720.2-201ENST00000624755 279 ntBASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.41□□□□□ -1.7
RUFY4Q6ZNE9 USP8P1-201ENST00000494673 3183 ntBASIC4.4□□□□□ -1.7
RUFY4Q6ZNE9 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.4□□□□□ -1.7
RUFY4Q6ZNE9 AC118273.1-201ENST00000525324 3006 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 RNA5SP322-201ENST00000363617 119 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 RNA5SP399-201ENST00000364003 117 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 SNORD14B-201ENST00000364533 90 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 SNORA40C-201ENST00000391285 128 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 RN7SKP156-201ENST00000410308 342 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AC243428.1-201ENST00000421099 264 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 TOMM20P4-201ENST00000427861 435 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AC007919.1-201ENST00000429380 217 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 RPL23AP50-201ENST00000434149 455 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 Z82210.1-201ENST00000440037 231 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AL356535.1-201ENST00000440335 398 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AC068781.1-201ENST00000488231 618 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 ACA59.1-201ENST00000515966 143 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-764P-201ENST00000516396 105 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AC007485.1-201ENST00000616755 206 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AL132822.1-201ENST00000617063 513 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 AL732372.2-225ENST00000642124 456 ntBASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RUFY4Q6ZNE9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-933P-201ENST00000384424 107 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-790P-201ENST00000384479 105 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 YME1L1P1-201ENST00000429435 297 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 RPS15AP10-201ENST00000432472 382 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 PIGFP3-201ENST00000441918 722 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 AL645939.1-201ENST00000453429 797 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 KC877373.1-201ENST00000479066 408 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 PPIAP15-201ENST00000479662 484 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 AC069499.1-201ENST00000489433 509 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 AC109479.2-201ENST00000517842 174 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 LINC02471-203ENST00000641941 4752 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RUFY4Q6ZNE9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-1309P-201ENST00000363305 108 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-1059P-201ENST00000363752 98 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-196P-201ENST00000384315 107 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 Y_RNA.496-201ENST00000384444 101 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 MIR34A-201ENST00000385130 110 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 RNU2-68P-201ENST00000410878 191 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AL160004.2-201ENST00000432935 350 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 VDAC1P3-201ENST00000434069 851 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 CECR9-201ENST00000453421 199 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC128713.1-201ENST00000471495 306 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC113155.1-201ENST00000511141 769 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 Y_RNA.721-201ENST00000517207 102 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC025755.1-201ENST00000521306 278 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 TRAV32-201ENST00000553993 340 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC087499.8-201ENST00000578406 226 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC123912.5-201ENST00000605470 343 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AL121917.1-203ENST00000605534 577 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 SNORA51-201ENST00000606420 132 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC006023.2-201ENST00000609916 167 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 AC084757.4-201ENST00000616350 526 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 FAM35DP-201ENST00000323387 2712 ntBASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RUFY4Q6ZNE9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RUFY4Q6ZNE9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.37□□□□□ -1.71
RUFY4Q6ZNE9 AC022336.2-201ENST00000568966 2538 ntBASIC4.37□□□□□ -1.71
RUFY4Q6ZNE9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RUFY4Q6ZNE9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RUFY4Q6ZNE9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.37□□□□□ -1.71
RUFY4Q6ZNE9 MIR208A-201ENST00000362287 71 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 276.4 ms