Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC108032.1-201ENST00000416706 207 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.14□□□□□ -1.75
E4F1Q66K89 AL691449.1-201ENST00000426570 421 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 AC007560.1-201ENST00000426912 237 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.14□□□□□ -1.75
E4F1Q66K89 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.14□□□□□ -1.75
E4F1Q66K89 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.14□□□□□ -1.75
E4F1Q66K89 AC026784.1-201ENST00000507986 352 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 RNU6-635P-201ENST00000516651 102 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
E4F1Q66K89 MRPL49P2-201ENST00000521066 465 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 AP002404.1-201ENST00000532005 451 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.14□□□□□ -1.75
E4F1Q66K89 AC113195.1-201ENST00000579952 141 ntBASIC4.14□□□□□ -1.75
E4F1Q66K89 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.14□□□□□ -1.75
E4F1Q66K89 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
E4F1Q66K89 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.14□□□□□ -1.75
E4F1Q66K89 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
E4F1Q66K89 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.14□□□□□ -1.75
E4F1Q66K89 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.14□□□□□ -1.75
E4F1Q66K89 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
E4F1Q66K89 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.14□□□□□ -1.75
E4F1Q66K89 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
E4F1Q66K89 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
E4F1Q66K89 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.13□□□□□ -1.75
E4F1Q66K89 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.13□□□□□ -1.75
E4F1Q66K89 RNU6-238P-201ENST00000363313 106 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 SNORA7.2-201ENST00000364446 145 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 SNORD14B-201ENST00000364533 90 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 RNU6-1317P-201ENST00000364582 104 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 RNU6-99P-201ENST00000364721 107 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 SNORA56-201ENST00000383966 129 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 MIR10A-201ENST00000385043 110 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 RNU6-101P-201ENST00000410323 104 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 RNU6-174P-201ENST00000410406 106 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 Y_RNA.623-201ENST00000411128 95 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 AL096701.2-201ENST00000416920 238 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 MYL8P-204ENST00000431574 518 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 H2AFZP6-201ENST00000444403 394 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
E4F1Q66K89 AL353752.1-201ENST00000454946 260 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 RNU6-1037P-201ENST00000459571 107 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 HMGN2P13-201ENST00000476476 274 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 RPL17P19-201ENST00000489069 552 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 AC139453.3-201ENST00000493276 369 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.13□□□□□ -1.75
E4F1Q66K89 CBX3P8-201ENST00000532412 525 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.13□□□□□ -1.75
E4F1Q66K89 AC004817.2-201ENST00000561794 651 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 SUB1P3-201ENST00000564581 315 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 AC007448.1-201ENST00000582714 234 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.13□□□□□ -1.75
E4F1Q66K89 MIR6820-201ENST00000611508 62 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 AL391261.4-201ENST00000616012 481 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 FP236240.3-201ENST00000623061 327 ntBASIC4.13□□□□□ -1.75
E4F1Q66K89 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.13□□□□□ -1.75
E4F1Q66K89 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
E4F1Q66K89 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
E4F1Q66K89 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
E4F1Q66K89 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.12□□□□□ -1.75
E4F1Q66K89 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
E4F1Q66K89 RPL9P7-201ENST00000330965 580 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 Y_RNA.153-201ENST00000363615 91 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 Y_RNA.424-201ENST00000384063 103 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 AL022722.2-201ENST00000402519 180 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 RPL21P65-201ENST00000406094 466 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
E4F1Q66K89 RPS15AP10-201ENST00000432472 382 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 RPS6P12-201ENST00000432491 726 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 NDUFB1P1-201ENST00000435191 180 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.12□□□□□ -1.75
E4F1Q66K89 AL513043.1-201ENST00000439124 535 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 RPL9P9-202ENST00000466501 579 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 S100A11P1-201ENST00000477525 312 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 PPIAP15-201ENST00000479662 484 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 AC022447.4-201ENST00000504053 364 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 RNU4-77P-201ENST00000516692 156 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 SNORA31.19-201ENST00000517079 126 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 RNA5SP165-201ENST00000517142 115 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.12□□□□□ -1.75
E4F1Q66K89 MIR4644-201ENST00000579929 84 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 MIR4425-201ENST00000580572 84 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 AL591034.3-201ENST00000605511 685 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 AC112200.1-201ENST00000625015 234 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 MIR7641-1-201ENST00000627518 61 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 AL606534.2-204ENST00000635008 178 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 AC008725.1-201ENST00000605123 2263 ntBASIC4.12□□□□□ -1.75
E4F1Q66K89 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
E4F1Q66K89 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.12□□□□□ -1.75
E4F1Q66K89 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
E4F1Q66K89 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
E4F1Q66K89 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.12□□□□□ -1.75
E4F1Q66K89 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
E4F1Q66K89 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
E4F1Q66K89 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.11□□□□□ -1.75
E4F1Q66K89 AC116096.1-201ENST00000566804 2314 ntBASIC4.11□□□□□ -1.75
E4F1Q66K89 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.11□□□□□ -1.75
E4F1Q66K89 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
E4F1Q66K89 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms