Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 MT-TR-201ENST00000387439 65 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AL356968.1-201ENST00000416622 474 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AL158156.1-201ENST00000422509 473 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AL049874.1-201ENST00000489560 388 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AC104564.1-201ENST00000493028 407 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 RNU6-408P-201ENST00000515910 100 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AC144568.1-201ENST00000520139 137 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AC022695.1-201ENST00000522089 237 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 MIR5187-201ENST00000583479 76 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AL121917.1-203ENST00000605534 577 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AC015813.4-201ENST00000610469 179 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AL360181.4-201ENST00000621752 134 ntBASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.9□□□□□ -1.63
USPL1Q5W0Q7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 OR4G2P-202ENST00000641004 1759 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 Y_RNA.210-201ENST00000364161 110 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 Y_RNA.288-201ENST00000364854 92 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 SNORA11.2-201ENST00000408318 127 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 RNU6-1025P-201ENST00000410629 104 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 EIF4EP2-201ENST00000422816 654 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 USP9YP16-201ENST00000430287 407 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 USP9YP23-201ENST00000455085 407 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AC133134.1-201ENST00000466800 359 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 RPL21P13-201ENST00000488305 481 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AL359273.1-201ENST00000510918 627 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 NDUFB4P9-201ENST00000511646 388 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 RNU6-1143P-201ENST00000516125 104 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 SNORA31.20-201ENST00000517111 133 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 IGKV2-38-201ENST00000517443 247 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AC040926.1-201ENST00000530195 238 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 CBX3P8-201ENST00000532412 525 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 MIR5188-201ENST00000583467 113 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 VN1R91P-201ENST00000594377 169 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AC012603.1-201ENST00000606424 528 ntBASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
USPL1Q5W0Q7 RNU6-335P-201ENST00000364563 113 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 U8.8-201ENST00000365399 135 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 Y_RNA.551-201ENST00000384661 102 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 AL353997.1-201ENST00000432936 108 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 AC083863.1-201ENST00000438811 231 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 FABP5P15-201ENST00000453566 214 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 U8.21-201ENST00000459536 136 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 AL160314.1-201ENST00000490836 438 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 RNA5SP154-201ENST00000516193 111 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 RNU2-53P-201ENST00000516257 147 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 MIR5195-201ENST00000583555 115 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 U6.104-201ENST00000637979 90 ntBASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
USPL1Q5W0Q7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 Y_RNA.257-201ENST00000364596 102 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 Y_RNA.307-201ENST00000365022 117 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 RNU6-26P-201ENST00000383985 107 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 RPL21P1-201ENST00000399532 476 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 MTCO3P19-201ENST00000415864 321 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 NDUFB4P7-201ENST00000423198 363 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 AC079780.1-201ENST00000428259 207 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 RN7SKP18-201ENST00000516005 275 ntBASIC4.87□□□□□ -1.63
USPL1Q5W0Q7 RNU6-911P-201ENST00000516523 104 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms