Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LONRF3Q496Y0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 Y_RNA.142-201ENST00000363491 102 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 SNORA32.2-201ENST00000384049 122 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 RNU6-14P-201ENST00000384630 106 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 RNU4-46P-201ENST00000410818 138 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 PDCL2P1-201ENST00000419302 352 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AL158156.1-201ENST00000422509 473 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 RPL35AP12-201ENST00000425362 338 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 RPL7P12-201ENST00000446719 750 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AC092001.1-201ENST00000453012 261 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 RNU7-23P-201ENST00000459465 62 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AC009901.1-201ENST00000506703 541 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 MTND3P22-201ENST00000510932 243 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 RNU6-123P-201ENST00000516163 102 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 RNU6-685P-201ENST00000517088 95 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 RNU6-1314P-201ENST00000517139 104 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AC107934.2-201ENST00000518653 310 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 BTF3P12-201ENST00000519620 469 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AC107953.1-201ENST00000522216 297 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 MIR5583-1-201ENST00000580941 59 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AC005858.4-201ENST00000623191 700 ntBASIC3.83□□□□□ -1.8
LONRF3Q496Y0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.83□□□□□ -1.8
LONRF3Q496Y0 AC103710.2-202ENST00000641454 2853 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LONRF3Q496Y0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AC138915.1-201ENST00000565427 1685 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 RNU1-75P-201ENST00000347264 129 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 RNA5SP197-201ENST00000363357 119 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 SNORD81.2-201ENST00000365153 76 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 SNORD21-201ENST00000383953 95 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 RNU6-190P-201ENST00000384154 102 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 MT-TD-201ENST00000387419 68 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 RNU6-817P-201ENST00000391083 104 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AL139397.2-201ENST00000404529 772 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 RNU4-26P-201ENST00000410270 107 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 RN7SKP220-201ENST00000410611 288 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AC126124.2-201ENST00000413542 321 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 CALM2P2-201ENST00000428512 440 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AL592045.1-201ENST00000429867 352 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AL591212.2-201ENST00000433923 257 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AC008264.1-201ENST00000447612 367 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 RBMY2UP-201ENST00000453474 324 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AL590639.1-201ENST00000456484 337 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 SNORA31.3-201ENST00000516029 96 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 Y_RNA.665-201ENST00000516177 98 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 Y_RNA.689-201ENST00000516589 107 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 SNORA31.26-201ENST00000517250 137 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.82□□□□□ -1.8
LONRF3Q496Y0 MTND4P7-201ENST00000523876 130 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AL137161.1-201ENST00000532231 390 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AL391261.3-201ENST00000557194 520 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 MIR5195-201ENST00000583555 115 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 HMGN2P15-201ENST00000585707 270 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AC008739.2-201ENST00000597006 317 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AC174048.1-201ENST00000603389 144 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AL158032.1-201ENST00000605401 106 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AC099506.2-201ENST00000623074 221 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 AC002064.3-201ENST00000623448 346 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LONRF3Q496Y0 MIR3651-201ENST00000630427 90 ntBASIC3.82□□□□□ -1.8
LONRF3Q496Y0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LONRF3Q496Y0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
LONRF3Q496Y0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 MTND4P35-201ENST00000604257 1375 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 Y_RNA.166-201ENST00000363730 102 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 RNU1-33P-201ENST00000364249 162 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 RNU6-522P-201ENST00000364497 107 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 Y_RNA.356-201ENST00000365475 113 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 RNU6-116P-201ENST00000384042 109 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 RPS12P24-201ENST00000412619 387 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 AC092809.3-201ENST00000415453 231 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 MTCO3P46-201ENST00000425787 232 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 UBE2V1P7-201ENST00000446395 340 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 AMD1P1-201ENST00000457220 922 ntBASIC3.81□□□□□ -1.8
LONRF3Q496Y0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.81□□□□□ -1.8
LONRF3Q496Y0 AC007547.1-201ENST00000462177 490 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms