Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.44□□□□□ -2.18
FOXF1Q12946 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.44□□□□□ -2.18
FOXF1Q12946 DYNLL1P5-201ENST00000467158 270 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
FOXF1Q12946 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
FOXF1Q12946 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.44□□□□□ -2.18
FOXF1Q12946 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 MIR4293-201ENST00000584305 78 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 AC005014.3-201ENST00000605985 190 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 BX248123.2-201ENST00000606318 124 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 AC025754.2-201ENST00000606491 432 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 AC106052.1-201ENST00000608029 497 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 AC068944.2-201ENST00000610373 403 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 uc_338.14-201ENST00000613162 166 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.44□□□□□ -2.18
FOXF1Q12946 AC005296.1-201ENST00000616145 209 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 AC022306.3-201ENST00000619930 550 ntBASIC1.44□□□□□ -2.18
FOXF1Q12946 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.44□□□□□ -2.18
FOXF1Q12946 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
FOXF1Q12946 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
FOXF1Q12946 RNU6-931P-201ENST00000363850 107 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 RNU5A-8P-201ENST00000364102 114 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 RNU6-769P-201ENST00000384407 104 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 MIR676-201ENST00000390702 67 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 U8.14-201ENST00000390843 143 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AL139397.2-201ENST00000404529 772 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AL021407.1-201ENST00000404531 386 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 RNU2-68P-201ENST00000410878 191 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 SNORD56-201ENST00000413522 71 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AC106883.1-201ENST00000418805 562 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 BX510359.4-201ENST00000423750 193 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 RPS3AP44-201ENST00000425466 790 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXF1Q12946 AC010153.1-201ENST00000432862 727 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.43□□□□□ -2.18
FOXF1Q12946 LARP1BP3-201ENST00000437229 869 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
FOXF1Q12946 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXF1Q12946 KLF3P2-201ENST00000465138 268 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AC055855.1-201ENST00000489563 579 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 UBE2V1P12-201ENST00000503954 474 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AC119751.4-201ENST00000507498 357 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXF1Q12946 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXF1Q12946 SNORA31.6-201ENST00000516241 130 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 RNU7-193P-201ENST00000516723 65 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.43□□□□□ -2.18
FOXF1Q12946 AC024619.4-201ENST00000580924 316 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AC105245.1-201ENST00000581934 244 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AC104984.5-201ENST00000586878 94 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXF1Q12946 AC007229.1-201ENST00000590455 412 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AL109918.3-201ENST00000603072 338 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AL157392.4-201ENST00000609756 345 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 AL391834.2-201ENST00000609982 546 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
FOXF1Q12946 AC006927.4-201ENST00000639187 543 ntBASIC1.43□□□□□ -2.18
FOXF1Q12946 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
FOXF1Q12946 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXF1Q12946 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXF1Q12946 RNU1-17P-201ENST00000363022 152 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 RNU6-486P-201ENST00000363116 107 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 RNU6-433P-201ENST00000363216 104 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 RNU6-157P-201ENST00000383957 107 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 RNU6-723P-201ENST00000383973 107 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 RNU6-906P-201ENST00000384700 70 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 RN7SKP158-201ENST00000410453 326 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AL445669.1-201ENST00000426743 755 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXF1Q12946 MTATP6P30-201ENST00000443540 664 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.42□□□□□ -2.18
FOXF1Q12946 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AC108059.3-201ENST00000456388 214 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 AL121769.1-201ENST00000469473 401 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.42□□□□□ -2.18
FOXF1Q12946 RPF2P2-201ENST00000504693 896 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 DEFB108A-201ENST00000530110 222 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 MTCO2P15-201ENST00000532655 656 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.42□□□□□ -2.18
FOXF1Q12946 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AC021739.1-201ENST00000559631 174 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXF1Q12946 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXF1Q12946 AC112187.2-201ENST00000604345 283 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 AC011939.3-201ENST00000613686 466 ntBASIC1.42□□□□□ -2.18
FOXF1Q12946 AC091965.5-201ENST00000624785 342 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms