Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC127391.1-201ENST00000411737 98 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 MTND1P21-201ENST00000412991 285 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 AC108667.1-201ENST00000428618 249 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 COX7BP2-201ENST00000437976 242 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 SNRPGP13-201ENST00000442212 177 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 MTCO3P45-201ENST00000443036 613 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 AC020550.1-201ENST00000447385 163 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.25□□□□□ -2.21
H3F3AP84243 MTND2P30-201ENST00000456663 382 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 AC008379.1-201ENST00000463655 464 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 CYCSP27-201ENST00000527643 293 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
H3F3AP84243 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 AC023825.1-201ENST00000566704 1030 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
H3F3AP84243 DPPA3P3-201ENST00000603842 430 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.25□□□□□ -2.21
H3F3AP84243 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.25□□□□□ -2.21
H3F3AP84243 AL512598.1-201ENST00000610158 273 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
H3F3AP84243 AC099842.1-201ENST00000619919 596 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 AL445264.1-201ENST00000621719 171 ntBASIC1.25□□□□□ -2.21
H3F3AP84243 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AL161722.3-201ENST00000605789 2983 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AL161781.1-201ENST00000354277 403 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 RNU6-1280P-201ENST00000365211 107 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 MIR29C-201ENST00000385231 88 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 RNU11-3P-201ENST00000391111 133 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.24□□□□□ -2.21
H3F3AP84243 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.24□□□□□ -2.21
H3F3AP84243 UBE2V1P4-201ENST00000425374 344 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.24□□□□□ -2.21
H3F3AP84243 MTCO2P20-201ENST00000437339 673 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 FCF1P6-201ENST00000456841 595 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AC139453.3-201ENST00000493276 369 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AC026414.1-201ENST00000504046 698 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.24□□□□□ -2.21
H3F3AP84243 RNU6-991P-201ENST00000516168 107 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 RNU6-678P-201ENST00000516832 109 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 OR6C7P-201ENST00000547875 934 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AL161670.1-201ENST00000554348 137 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 RPS3AP4-201ENST00000555161 764 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 MIR4769-201ENST00000584126 77 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AC021646.1-201ENST00000605469 484 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AL583856.2-201ENST00000606298 543 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AC034229.4-201ENST00000607861 441 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.24□□□□□ -2.21
H3F3AP84243 U6.99-201ENST00000637524 83 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 MTND5P10-201ENST00000603719 1809 ntBASIC1.24□□□□□ -2.21
H3F3AP84243 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
H3F3AP84243 RNU6-512P-201ENST00000364438 103 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 RNU6-707P-201ENST00000364647 95 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 MIR597-201ENST00000384968 97 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
H3F3AP84243 RNU6-952P-201ENST00000391164 108 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.23□□□□□ -2.21
H3F3AP84243 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.23□□□□□ -2.21
H3F3AP84243 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 GTF2IP3-201ENST00000433887 494 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 MTND4P6-201ENST00000438297 472 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 MTATP6P30-201ENST00000443540 664 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 FABP5P15-201ENST00000453566 214 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.23□□□□□ -2.21
H3F3AP84243 RNU7-136P-201ENST00000458819 69 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.23□□□□□ -2.21
H3F3AP84243 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.23□□□□□ -2.21
H3F3AP84243 TPT1P8-201ENST00000510120 555 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 RNU6-237P-201ENST00000515985 71 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 RNU6-1183P-201ENST00000517054 60 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.23□□□□□ -2.21
H3F3AP84243 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.23□□□□□ -2.21
H3F3AP84243 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
H3F3AP84243 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.23□□□□□ -2.21
H3F3AP84243 AC008269.2-201ENST00000561915 1105 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.23□□□□□ -2.21
H3F3AP84243 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.23□□□□□ -2.21
H3F3AP84243 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.23□□□□□ -2.21
H3F3AP84243 AP000942.3-201ENST00000603702 160 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 AL359314.1-201ENST00000616913 261 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 U1.36-201ENST00000620684 176 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 AC138627.2-201ENST00000624202 601 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 AL359757.2-201ENST00000624309 274 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 CDR1-202ENST00000625883 1485 ntBASIC1.23□□□□□ -2.21
H3F3AP84243 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
H3F3AP84243 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.22□□□□□ -2.21
H3F3AP84243 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.22□□□□□ -2.21
H3F3AP84243 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
H3F3AP84243 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
H3F3AP84243 RNU6-1122P-201ENST00000384449 107 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.22□□□□□ -2.21
H3F3AP84243 AC009310.1-201ENST00000414414 451 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 AP1B1P2-201ENST00000416196 106 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.22□□□□□ -2.21
H3F3AP84243 SDAD1P3-201ENST00000427380 333 ntBASIC1.22□□□□□ -2.21
H3F3AP84243 MTCO1P3-201ENST00000429327 192 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms