Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NKX6-1P78426 AL021368.2-201ENST00000606125 5352 ntBASIC3.5□□□□□ -1.85
NKX6-1P78426 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX6-1P78426 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NKX6-1P78426 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NKX6-1P78426 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX6-1P78426 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX6-1P78426 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 RNU6-72P-201ENST00000384285 79 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 RNU6-95P-201ENST00000384697 107 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 SNORD73A-201ENST00000386062 65 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NKX6-1P78426 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX6-1P78426 SNORD56-201ENST00000413522 71 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 MTCO2P27-201ENST00000420740 428 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 AC093151.1-201ENST00000427711 313 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 HIGD1AP2-201ENST00000446367 280 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 AL031274.1-201ENST00000450334 232 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 AC010099.1-201ENST00000455434 375 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 RPL23AP62-201ENST00000463396 453 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 RN7SL585P-201ENST00000470538 280 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 RPS27AP10-201ENST00000496103 208 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 HMGN1P13-201ENST00000505795 138 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 Y_RNA.687-201ENST00000516558 91 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 SNORA70.24-201ENST00000517233 118 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.49□□□□□ -1.85
NKX6-1P78426 AC104576.1-201ENST00000524225 88 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX6-1P78426 AC025627.2-201ENST00000576220 160 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX6-1P78426 AC123912.5-201ENST00000605470 343 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 MIR6128-201ENST00000615528 109 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX6-1P78426 AC032011.1-201ENST00000611703 1549 ntBASIC3.49□□□□□ -1.85
NKX6-1P78426 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX6-1P78426 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX6-1P78426 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
NKX6-1P78426 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX6-1P78426 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX6-1P78426 SNORD62.1-201ENST00000362541 86 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 RNU5E-7P-201ENST00000365290 117 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 SNORA9-201ENST00000384215 133 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 RNU6-198P-201ENST00000384258 104 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 RNU6-601P-201ENST00000384540 107 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 MIR491-201ENST00000384877 84 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NKX6-1P78426 Z98941.1-201ENST00000407764 100 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 RN7SKP156-201ENST00000410308 342 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 RNU6-1077P-201ENST00000410506 102 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX6-1P78426 AL590632.1-201ENST00000424289 371 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX6-1P78426 RPS15AP10-201ENST00000432472 382 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX6-1P78426 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX6-1P78426 RNU6-1037P-201ENST00000459571 107 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX6-1P78426 AC110768.1-201ENST00000509222 400 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX6-1P78426 SNORA31.1-201ENST00000515993 133 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 SNORA31.5-201ENST00000516190 133 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX6-1P78426 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX6-1P78426 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX6-1P78426 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX6-1P78426 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX6-1P78426 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX6-1P78426 FRG2DP-202ENST00000566967 323 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 MIR4474-201ENST00000579189 78 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 MIR6868-201ENST00000611215 58 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 AC009093.8-201ENST00000641769 292 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX6-1P78426 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
NKX6-1P78426 ADAM3A-203ENST00000461344 2157 ntBASIC3.48□□□□□ -1.85
NKX6-1P78426 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX6-1P78426 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NKX6-1P78426 AC006026.1-201ENST00000444025 1803 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX6-1P78426 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NKX6-1P78426 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX6-1P78426 SNORD35B-201ENST00000363660 87 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 RNU4-76P-201ENST00000364509 141 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 RNU6-898P-201ENST00000365627 104 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 RNU6-213P-201ENST00000384051 104 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 MIR34B-201ENST00000385076 84 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX6-1P78426 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX6-1P78426 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX6-1P78426 AL159987.2-201ENST00000432754 307 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX6-1P78426 AC098831.1-201ENST00000440661 216 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NKX6-1P78426 AP002884.2-201ENST00000471647 395 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 RPL23AP45-201ENST00000476406 468 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX6-1P78426 RN7SL271P-201ENST00000487601 295 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 RPS29P20-201ENST00000489592 171 ntBASIC3.47□□□□□ -1.85
NKX6-1P78426 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX6-1P78426 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms