Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC074344.1-201ENST00000512823 224 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.65□□□□□ -1.99
CX3CL1P78423 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CL1P78423 CENPUP1-201ENST00000526649 1202 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CL1P78423 AC011611.1-201ENST00000552179 197 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.65□□□□□ -1.99
CX3CL1P78423 AC021739.1-201ENST00000559631 174 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AC010653.1-201ENST00000571108 881 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 SNORA59B-202ENST00000578183 701 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 MIR1254-2-201ENST00000579553 63 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AL645944.1-201ENST00000603857 493 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AL031601.2-202ENST00000622650 282 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AC024614.3-201ENST00000637860 256 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 ADAM3A-203ENST00000461344 2157 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 AC008669.1-201ENST00000565823 2178 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CX3CL1P78423 AC004520.1-201ENST00000608362 1413 ntBASIC2.65□□□□□ -1.99
CX3CL1P78423 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.99
CX3CL1P78423 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CX3CL1P78423 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
CX3CL1P78423 AL356274.2-201ENST00000624379 3752 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.64□□□□□ -1.99
CX3CL1P78423 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.64□□□□□ -1.99
CX3CL1P78423 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.64□□□□□ -1.99
CX3CL1P78423 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CX3CL1P78423 RNU1-105P-201ENST00000363470 161 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 Y_RNA.248-201ENST00000364501 109 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 DYNLT3P1-201ENST00000378574 347 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CX3CL1P78423 SNORA48.7-201ENST00000391302 135 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 RPL21P3-201ENST00000395517 478 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CX3CL1P78423 RN7SKP27-201ENST00000410684 333 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AC016831.2-201ENST00000417179 352 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CL1P78423 AC009414.1-201ENST00000427200 443 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CL1P78423 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CL1P78423 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CL1P78423 RNU7-167P-201ENST00000459160 62 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AC146507.2-201ENST00000460608 476 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 RPS29P25-201ENST00000481709 171 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 RPL21P129-201ENST00000491732 478 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CX3CL1P78423 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CL1P78423 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CL1P78423 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.64□□□□□ -1.99
CX3CL1P78423 AC006199.1-201ENST00000548728 219 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AC090115.3-201ENST00000553218 849 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AC234778.2-201ENST00000566241 354 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 MIR4429-201ENST00000580105 73 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 MIR4276-201ENST00000584832 70 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.64□□□□□ -1.99
CX3CL1P78423 AC008739.3-201ENST00000603262 127 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AL133393.1-201ENST00000603277 287 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AP000907.4-201ENST00000604143 237 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AL162713.1-201ENST00000604480 262 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 U2.17-201ENST00000611454 95 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 uc_338.1-201ENST00000612113 180 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 MIR6134-201ENST00000617606 109 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 MIR3662-201ENST00000637030 95 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AC008264.2-201ENST00000610193 3731 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 AC103988.1-201ENST00000566382 2177 ntBASIC2.64□□□□□ -1.99
CX3CL1P78423 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
CX3CL1P78423 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CX3CL1P78423 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CL1P78423 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CX3CL1P78423 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CX3CL1P78423 RNU1-33P-201ENST00000364249 162 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 RNA5SP139-201ENST00000364340 117 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 Y_RNA.378-201ENST00000365652 113 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CX3CL1P78423 MIR670-201ENST00000390142 98 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 RNA5SP219-201ENST00000390940 113 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.63□□□□□ -1.99
CX3CL1P78423 PGBD4P6-201ENST00000421501 610 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AC097713.2-201ENST00000430199 356 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AL139415.2-201ENST00000431968 163 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AL159987.2-201ENST00000432754 307 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AC005019.1-201ENST00000436455 431 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.63□□□□□ -1.99
CX3CL1P78423 CALM1P1-201ENST00000442082 433 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CX3CL1P78423 AL358232.1-201ENST00000448030 501 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AC233279.1-201ENST00000455300 423 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 BTF3P15-201ENST00000455606 336 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AC091885.1-201ENST00000506658 268 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.63□□□□□ -1.99
CX3CL1P78423 AC078814.3-201ENST00000553036 491 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 OR11H5P-201ENST00000554039 926 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AC005476.1-201ENST00000554427 397 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AL121821.2-201ENST00000556081 394 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.63□□□□□ -1.99
CX3CL1P78423 LINC00933-203ENST00000559812 219 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 AC025281.1-201ENST00000567026 265 ntBASIC2.63□□□□□ -1.99
CX3CL1P78423 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.63□□□□□ -1.99
CX3CL1P78423 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.63□□□□□ -1.99
CX3CL1P78423 AL035413.2-201ENST00000604801 525 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms