Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL160275.3-201ENST00000423876 471 ntBASIC0.69□□□□□ -2.3
UBA52P62987 AL022400.1-201ENST00000423946 935 ntBASIC0.69□□□□□ -2.3
UBA52P62987 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
UBA52P62987 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.69□□□□□ -2.3
UBA52P62987 THAP5P1-201ENST00000439089 262 ntBASIC0.69□□□□□ -2.3
UBA52P62987 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.69□□□□□ -2.3
UBA52P62987 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.69□□□□□ -2.3
UBA52P62987 C1DP3-201ENST00000455013 423 ntBASIC0.69□□□□□ -2.3
UBA52P62987 CYP2C59P-201ENST00000457790 269 ntBASIC0.69□□□□□ -2.3
UBA52P62987 AC092757.1-201ENST00000467293 467 ntBASIC0.69□□□□□ -2.3
UBA52P62987 AC117525.1-201ENST00000515228 503 ntBASIC0.69□□□□□ -2.3
UBA52P62987 RNU6-405P-201ENST00000516637 110 ntBASIC0.69□□□□□ -2.3
UBA52P62987 RNU6-467P-201ENST00000517027 110 ntBASIC0.69□□□□□ -2.3
UBA52P62987 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.69□□□□□ -2.3
UBA52P62987 AC090115.3-201ENST00000553218 849 ntBASIC0.69□□□□□ -2.3
UBA52P62987 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
UBA52P62987 MIR98-201ENST00000606724 119 ntBASIC0.69□□□□□ -2.3
UBA52P62987 AC021851.1-201ENST00000608537 1082 ntBASIC0.69□□□□□ -2.3
UBA52P62987 MTND5P31-201ENST00000419366 1374 ntBASIC0.69□□□□□ -2.3
UBA52P62987 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
UBA52P62987 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
UBA52P62987 AL355615.1-201ENST00000406187 641 ntBASIC0.68□□□□□ -2.3
UBA52P62987 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.68□□□□□ -2.3
UBA52P62987 CST2P1-201ENST00000425770 87 ntBASIC0.68□□□□□ -2.3
UBA52P62987 AC234064.1-201ENST00000436312 247 ntBASIC0.68□□□□□ -2.3
UBA52P62987 Z82210.1-201ENST00000440037 231 ntBASIC0.68□□□□□ -2.3
UBA52P62987 AC114982.2-201ENST00000461396 358 ntBASIC0.68□□□□□ -2.3
UBA52P62987 RPL9P9-202ENST00000466501 579 ntBASIC0.68□□□□□ -2.3
UBA52P62987 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.68□□□□□ -2.3
UBA52P62987 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
UBA52P62987 RNA5SP404-201ENST00000517118 132 ntBASIC0.68□□□□□ -2.3
UBA52P62987 RAB11AP2-201ENST00000545905 639 ntBASIC0.68□□□□□ -2.3
UBA52P62987 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.68□□□□□ -2.3
UBA52P62987 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.68□□□□□ -2.3
UBA52P62987 AL359854.1-201ENST00000614203 1594 ntBASIC0.68□□□□□ -2.3
UBA52P62987 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.68□□□□□ -2.3
UBA52P62987 AC121333.1-201ENST00000567488 2709 ntBASIC0.68□□□□□ -2.3
UBA52P62987 RBBP8P1-201ENST00000449447 1844 ntBASIC0.68□□□□□ -2.3
UBA52P62987 DDX43P2-201ENST00000604753 1354 ntBASIC0.68□□□□□ -2.3
UBA52P62987 RNU6-271P-201ENST00000363858 105 ntBASIC0.67□□□□□ -2.3
UBA52P62987 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
UBA52P62987 MIR649-201ENST00000384843 97 ntBASIC0.67□□□□□ -2.3
UBA52P62987 ERHP2-201ENST00000402323 299 ntBASIC0.67□□□□□ -2.3
UBA52P62987 CR848007.2-201ENST00000424918 787 ntBASIC0.67□□□□□ -2.3
UBA52P62987 USP9YP24-201ENST00000434374 697 ntBASIC0.67□□□□□ -2.3
UBA52P62987 AL596276.1-201ENST00000434465 418 ntBASIC0.67□□□□□ -2.3
UBA52P62987 FCF1P6-201ENST00000456841 595 ntBASIC0.67□□□□□ -2.3
UBA52P62987 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
UBA52P62987 AC018437.1-201ENST00000492214 406 ntBASIC0.67□□□□□ -2.3
UBA52P62987 MIR449C-201ENST00000516047 92 ntBASIC0.67□□□□□ -2.3
UBA52P62987 AC124947.2-202ENST00000552735 133 ntBASIC0.67□□□□□ -2.3
UBA52P62987 AC136932.1-201ENST00000574771 208 ntBASIC0.67□□□□□ -2.3
UBA52P62987 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.67□□□□□ -2.3
UBA52P62987 FAM71BP1-201ENST00000604431 523 ntBASIC0.67□□□□□ -2.3
UBA52P62987 AC008945.2-201ENST00000606056 604 ntBASIC0.67□□□□□ -2.3
UBA52P62987 AC004492.1-201ENST00000607036 742 ntBASIC0.67□□□□□ -2.3
UBA52P62987 AL136313.1-201ENST00000624804 202 ntBASIC0.67□□□□□ -2.3
UBA52P62987 AL109659.3-201ENST00000624985 950 ntBASIC0.67□□□□□ -2.3
UBA52P62987 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
UBA52P62987 NACAP2-201ENST00000318548 624 ntBASIC0.66□□□□□ -2.3
UBA52P62987 RNU6-670P-201ENST00000364312 104 ntBASIC0.66□□□□□ -2.3
UBA52P62987 SNORD82-201ENST00000365530 70 ntBASIC0.66□□□□□ -2.3
UBA52P62987 MIR135A2-201ENST00000384854 100 ntBASIC0.66□□□□□ -2.3
UBA52P62987 MIR95-201ENST00000385072 81 ntBASIC0.66□□□□□ -2.3
UBA52P62987 MIR561-201ENST00000385216 97 ntBASIC0.66□□□□□ -2.3
UBA52P62987 RNU2-32P-201ENST00000411193 191 ntBASIC0.66□□□□□ -2.3
UBA52P62987 C1DP1-201ENST00000426049 402 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AL135790.2-201ENST00000437701 267 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.66□□□□□ -2.3
UBA52P62987 AC007395.1-201ENST00000451333 677 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AC018868.1-201ENST00000491307 315 ntBASIC0.66□□□□□ -2.3
UBA52P62987 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
UBA52P62987 AP006587.4-201ENST00000526053 529 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AC012414.6-201ENST00000568241 401 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
UBA52P62987 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.66□□□□□ -2.3
UBA52P62987 SNRPGP17-201ENST00000603780 214 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AC011374.2-201ENST00000607135 526 ntBASIC0.66□□□□□ -2.3
UBA52P62987 uc_338.14-201ENST00000613162 166 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AL359314.1-201ENST00000616913 261 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AC009318.4-201ENST00000620496 486 ntBASIC0.66□□□□□ -2.3
UBA52P62987 AL442644.1-201ENST00000454390 3105 ntBASIC0.66□□□□□ -2.3
UBA52P62987 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
UBA52P62987 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
UBA52P62987 RNA5SP327-201ENST00000362494 101 ntBASIC0.65□□□□□ -2.31
UBA52P62987 RNU4-41P-201ENST00000364426 143 ntBASIC0.65□□□□□ -2.31
UBA52P62987 SNORD51-201ENST00000384320 80 ntBASIC0.65□□□□□ -2.31
UBA52P62987 MIR29C-201ENST00000385231 88 ntBASIC0.65□□□□□ -2.31
UBA52P62987 AC013410.2-201ENST00000422627 201 ntBASIC0.65□□□□□ -2.31
UBA52P62987 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.65□□□□□ -2.31
UBA52P62987 UBE2V2P3-201ENST00000433562 437 ntBASIC0.65□□□□□ -2.31
UBA52P62987 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
UBA52P62987 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.65□□□□□ -2.31
UBA52P62987 AL353718.1-201ENST00000451028 517 ntBASIC0.65□□□□□ -2.31
UBA52P62987 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.65□□□□□ -2.31
UBA52P62987 AL583843.1-201ENST00000456070 346 ntBASIC0.65□□□□□ -2.31
UBA52P62987 RPS26P55-201ENST00000471178 356 ntBASIC0.65□□□□□ -2.31
UBA52P62987 AC113420.1-201ENST00000507903 571 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms