Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS1BP61024 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.82□□□□□ -2.28
CKS1BP61024 AC011005.2-201ENST00000487324 359 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
CKS1BP61024 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS1BP61024 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 AC118282.2-201ENST00000508739 374 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 SNORA31.17-201ENST00000516953 127 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS1BP61024 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS1BP61024 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.82□□□□□ -2.28
CKS1BP61024 AC027807.1-201ENST00000559921 996 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.82□□□□□ -2.28
CKS1BP61024 WISP1-OT1-201ENST00000602893 642 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 AC091946.2-201ENST00000606105 291 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.82□□□□□ -2.28
CKS1BP61024 AC103810.9-201ENST00000606688 112 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 AL590396.4-201ENST00000636779 956 ntBASIC0.82□□□□□ -2.28
CKS1BP61024 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.82□□□□□ -2.28
CKS1BP61024 RNA5SP327-201ENST00000362494 101 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 RNU1-22P-201ENST00000363334 158 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 RNU6-839P-201ENST00000363347 108 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 RNU4-91P-201ENST00000364778 135 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
CKS1BP61024 RNU6-1032P-201ENST00000384100 107 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 SNORA29-201ENST00000384183 140 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 MTCO3P1-205ENST00000422088 832 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.81□□□□□ -2.28
CKS1BP61024 AC092001.1-201ENST00000453012 261 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 AP003033.1-201ENST00000527244 415 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 AP000873.5-201ENST00000533906 236 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 SNORA77B-201ENST00000578179 125 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 AC073544.2-201ENST00000601155 540 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.81□□□□□ -2.28
CKS1BP61024 AP003485.1-201ENST00000625093 753 ntBASIC0.81□□□□□ -2.28
CKS1BP61024 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CKS1BP61024 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.8□□□□□ -2.28
CKS1BP61024 SNORD33-201ENST00000362761 85 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 SNORD1A-201ENST00000364968 72 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CKS1BP61024 SNORA40.6-201ENST00000391153 128 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.8□□□□□ -2.28
CKS1BP61024 AL133264.1-201ENST00000407157 562 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 BTF3P4-201ENST00000418852 495 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AL591704.2-201ENST00000421658 181 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.8□□□□□ -2.28
CKS1BP61024 AC027119.1-201ENST00000440877 241 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 DUXAP8-207ENST00000456786 622 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AC026410.2-201ENST00000460281 156 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AC087477.1-201ENST00000465747 340 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.8□□□□□ -2.28
CKS1BP61024 RNU1-41P-201ENST00000516161 162 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 RNU1-48P-201ENST00000516400 162 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AC109329.1-201ENST00000518744 317 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.8□□□□□ -2.28
CKS1BP61024 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.8□□□□□ -2.28
CKS1BP61024 DNAJC19P9-201ENST00000555084 351 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AC090615.1-201ENST00000577519 154 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.8□□□□□ -2.28
CKS1BP61024 AL512598.1-201ENST00000610158 273 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AC013412.1-201ENST00000610687 192 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 AC106730.3-201ENST00000624568 641 ntBASIC0.8□□□□□ -2.28
CKS1BP61024 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.79□□□□□ -2.28
CKS1BP61024 RNU6-414P-201ENST00000363705 104 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 SNORD14B-201ENST00000364533 90 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CKS1BP61024 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.79□□□□□ -2.28
CKS1BP61024 RNU6-637P-201ENST00000384050 107 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CKS1BP61024 CYCSP49-201ENST00000420810 319 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 MTND4P24-201ENST00000424002 397 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 PRPS1P1-201ENST00000445305 876 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.79□□□□□ -2.28
CKS1BP61024 AC009474.2-201ENST00000451383 136 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 AC010409.1-201ENST00000487382 476 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.79□□□□□ -2.28
CKS1BP61024 RNU6-581P-201ENST00000516214 105 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 RNVU1-2-201ENST00000516326 135 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 RNU6-678P-201ENST00000516832 109 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 ACA59.2-201ENST00000517061 156 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 LINC00557-201ENST00000563184 1279 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.79□□□□□ -2.28
CKS1BP61024 MIR4295-201ENST00000585286 85 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.79□□□□□ -2.28
CKS1BP61024 AC133794.1-201ENST00000602731 914 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 AC073413.2-201ENST00000604332 360 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 AC004492.1-201ENST00000607036 742 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 AC006213.5-201ENST00000619673 288 ntBASIC0.79□□□□□ -2.28
CKS1BP61024 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.79□□□□□ -2.28
CKS1BP61024 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CKS1BP61024 RNU4-51P-201ENST00000364206 140 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 MTND5P25-201ENST00000430499 799 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 AC010153.1-201ENST00000432862 727 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 MTCO3P5-201ENST00000433620 714 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 HMGB1P31-201ENST00000437242 427 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.78□□□□□ -2.28
CKS1BP61024 RN7SKP210-201ENST00000459176 261 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 snoU13.15-201ENST00000459407 104 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms