Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDL3P58872 MTAPP1-201ENST00000489154 819 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.56□□□□□ -1.84
RHBDL3P58872 AC116655.1-201ENST00000508324 901 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 HIGD1AP13-201ENST00000509878 289 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 LRRC34P2-201ENST00000514850 553 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 RN7SKP132-201ENST00000516001 208 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.56□□□□□ -1.84
RHBDL3P58872 FAM92A1P1-201ENST00000528023 890 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.56□□□□□ -1.84
RHBDL3P58872 AGGF1P4-201ENST00000568249 801 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 MIR4703-201ENST00000577728 79 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 Z99129.1-201ENST00000612510 255 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RHBDL3P58872 MIR7153-201ENST00000637758 57 ntBASIC3.56□□□□□ -1.84
RHBDL3P58872 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHBDL3P58872 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.55□□□□□ -1.84
RHBDL3P58872 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RHBDL3P58872 MTND4P14-201ENST00000435799 1354 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RHBDL3P58872 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 AL513475.1-201ENST00000406602 315 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 U3.37-201ENST00000408528 213 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 RN7SKP285-201ENST00000410137 318 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 RNU4-55P-201ENST00000410731 137 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 EEF1A1P40-201ENST00000412883 573 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 AL031779.1-201ENST00000415663 330 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 RPL21P90-201ENST00000415692 466 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 AC010975.2-201ENST00000427781 588 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDL3P58872 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.55□□□□□ -1.84
RHBDL3P58872 RNU7-63P-201ENST00000459054 62 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 RNU6-581P-201ENST00000516214 105 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.55□□□□□ -1.84
RHBDL3P58872 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDL3P58872 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.55□□□□□ -1.84
RHBDL3P58872 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDL3P58872 AC009063.1-201ENST00000563342 702 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 AC092325.1-201ENST00000566449 554 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 MTND1P15-201ENST00000579262 949 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.55□□□□□ -1.84
RHBDL3P58872 AC005261.5-201ENST00000596280 355 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 AC012507.3-201ENST00000603556 477 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.55□□□□□ -1.84
RHBDL3P58872 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.55□□□□□ -1.84
RHBDL3P58872 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 SCARNA4-202ENST00000625402 129 ntBASIC3.55□□□□□ -1.84
RHBDL3P58872 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.55□□□□□ -1.84
RHBDL3P58872 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.55□□□□□ -1.84
RHBDL3P58872 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
RHBDL3P58872 RNU6-371P-201ENST00000364283 108 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 SNORD14B-201ENST00000364533 90 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RNU6-1180P-201ENST00000364935 107 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 SNORA75B-201ENST00000384053 137 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 SNORA18.3-201ENST00000384122 132 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 MIR578-201ENST00000384828 96 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 MIR518D-201ENST00000385014 87 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 AL139039.1-201ENST00000401900 692 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RPS4XP8-201ENST00000402039 771 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RAP1BP3-201ENST00000407180 549 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RNU2-66P-201ENST00000410650 161 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RNU2-25P-201ENST00000411041 191 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 NDUFB4P5-201ENST00000415445 361 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RPL31P12-201ENST00000422587 358 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RPS15AP7-201ENST00000439294 405 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 UBBP3-201ENST00000445497 241 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 AL162395.1-201ENST00000457882 422 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.54□□□□□ -1.84
RHBDL3P58872 AC083906.5-201ENST00000503722 328 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RNA5SP385-201ENST00000515947 110 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RNA5SP217-201ENST00000515959 91 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 RNA5SP356-201ENST00000515972 94 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 SCARNA17.1-201ENST00000516211 143 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 SCARNA17.2-201ENST00000516334 143 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RHBDL3P58872 MIR4298-201ENST00000584380 73 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 AC078795.2-201ENST00000602835 1252 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.54□□□□□ -1.84
RHBDL3P58872 SCARNA17.4-201ENST00000614296 143 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.54□□□□□ -1.84
RHBDL3P58872 MIR7157-201ENST00000635801 60 ntBASIC3.54□□□□□ -1.84
RHBDL3P58872 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RHBDL3P58872 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.54□□□□□ -1.84
RHBDL3P58872 MTND5P26-201ENST00000426018 1752 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHBDL3P58872 Y_RNA.159-201ENST00000363674 87 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 SNORA5B-201ENST00000363786 132 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 RNU1-100P-201ENST00000365255 165 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHBDL3P58872 RNU6-517P-201ENST00000384362 110 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 MIR10A-201ENST00000385043 110 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 FO393413.1-201ENST00000402892 195 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.53□□□□□ -1.84
RHBDL3P58872 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDL3P58872 RPL23AP20-201ENST00000447965 421 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDL3P58872 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDL3P58872 FAM92A1P2-202ENST00000504766 877 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 MIR892C-201ENST00000516410 77 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 ACA59.2-201ENST00000517061 156 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms