Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLRN1P58418 U8.8-201ENST00000365399 135 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 SNORA62-201ENST00000365493 153 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 PPIAP31-201ENST00000405422 495 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 RPL21P65-201ENST00000406094 466 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 CRYBB2P1-203ENST00000415709 538 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.51□□□□□ -1.85
CLRN1P58418 YPEL5P1-201ENST00000419731 367 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.51□□□□□ -1.85
CLRN1P58418 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.51□□□□□ -1.85
CLRN1P58418 TPT1P12-201ENST00000448968 492 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 RPL21P11-201ENST00000461458 483 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AC133134.1-201ENST00000466800 359 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 RPS26P15-201ENST00000488067 348 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 RPL17P19-201ENST00000489069 552 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AC015911.1-201ENST00000495111 156 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.51□□□□□ -1.85
CLRN1P58418 AC020593.1-201ENST00000507399 299 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 RNU6-1282P-201ENST00000516735 96 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AC025884.1-201ENST00000556034 378 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.51□□□□□ -1.85
CLRN1P58418 AC091167.4-201ENST00000605079 184 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AL591034.3-201ENST00000605511 685 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AC006023.2-201ENST00000609916 167 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 AL132822.1-201ENST00000617063 513 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 7SK.10-201ENST00000621414 298 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.51□□□□□ -1.85
CLRN1P58418 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.51□□□□□ -1.85
CLRN1P58418 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.51□□□□□ -1.85
CLRN1P58418 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.51□□□□□ -1.85
CLRN1P58418 MIR492-201ENST00000638676 116 ntBASIC3.51□□□□□ -1.85
CLRN1P58418 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.51□□□□□ -1.85
CLRN1P58418 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLRN1P58418 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLRN1P58418 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.51□□□□□ -1.85
CLRN1P58418 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLRN1P58418 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CLRN1P58418 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.5□□□□□ -1.85
CLRN1P58418 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLRN1P58418 UBE3AP2-201ENST00000429033 2259 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.5□□□□□ -1.85
CLRN1P58418 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CLRN1P58418 RLIMP1-201ENST00000339626 1680 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CLRN1P58418 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
CLRN1P58418 AC126755.2-208ENST00000327792 462 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC138969.1-213ENST00000331436 462 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 Y_RNA.80-201ENST00000362996 102 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 RNU6-99P-201ENST00000364721 107 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 RNA5SP97-201ENST00000365006 84 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.5□□□□□ -1.85
CLRN1P58418 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
CLRN1P58418 Y_RNA.485-201ENST00000384395 102 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 Y_RNA.645-201ENST00000391229 102 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 MIR548F4-201ENST00000408515 105 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.5□□□□□ -1.85
CLRN1P58418 AC099799.1-201ENST00000439809 192 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.5□□□□□ -1.85
CLRN1P58418 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.5□□□□□ -1.85
CLRN1P58418 SNRPGP5-201ENST00000456003 220 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC128713.1-201ENST00000471495 306 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 PPIAP15-201ENST00000479662 484 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC146944.2-203ENST00000502493 354 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC105758.1-201ENST00000506038 399 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC116655.1-201ENST00000508324 901 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC139495.1-202ENST00000513164 354 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.5□□□□□ -1.85
CLRN1P58418 RNU2-58P-201ENST00000516403 183 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 Y_RNA.687-201ENST00000516558 91 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 RNU4-77P-201ENST00000516692 156 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.5□□□□□ -1.85
CLRN1P58418 AC104695.3-201ENST00000604052 296 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 MIR378J-201ENST00000611988 109 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 AC004852.3-201ENST00000614131 326 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLRN1P58418 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLRN1P58418 AC005592.1-201ENST00000566527 1640 ntBASIC3.5□□□□□ -1.85
CLRN1P58418 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.5□□□□□ -1.85
CLRN1P58418 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLRN1P58418 AC118273.1-201ENST00000525324 3006 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CLRN1P58418 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN1P58418 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN1P58418 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 RNU6-428P-201ENST00000362942 107 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 Y_RNA.314-201ENST00000365114 102 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 RNU6-217P-201ENST00000384164 104 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 RNU6-196P-201ENST00000384315 107 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 MIR521-1-201ENST00000384902 87 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 MIR568-201ENST00000385036 95 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 RNU2-23P-201ENST00000410545 195 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 AL356095.1-201ENST00000417217 199 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.49□□□□□ -1.85
CLRN1P58418 SNRPEP4-201ENST00000435815 279 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 AC083863.1-201ENST00000438811 231 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 IPO7P1-201ENST00000442031 636 ntBASIC3.49□□□□□ -1.85
CLRN1P58418 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLRN1P58418 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.49□□□□□ -1.85
CLRN1P58418 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms