Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC090888.2-201ENST00000559765 1144 ntBASIC1.93□□□□□ -2.1
VSX2P58304 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.93□□□□□ -2.1
VSX2P58304 MIR5571-201ENST00000577998 113 ntBASIC1.93□□□□□ -2.1
VSX2P58304 APOOP1-201ENST00000604695 592 ntBASIC1.93□□□□□ -2.1
VSX2P58304 AC090970.3-201ENST00000612566 866 ntBASIC1.93□□□□□ -2.1
VSX2P58304 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VSX2P58304 AC010329.5-201ENST00000623497 2174 ntBASIC1.93□□□□□ -2.1
VSX2P58304 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VSX2P58304 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VSX2P58304 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VSX2P58304 RNA5SP125-201ENST00000364843 120 ntBASIC1.92□□□□□ -2.1
VSX2P58304 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
VSX2P58304 SNORA46.1-201ENST00000391069 153 ntBASIC1.92□□□□□ -2.1
VSX2P58304 RNU2-2P-201ENST00000410396 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 RNU6-920P-201ENST00000410926 92 ntBASIC1.92□□□□□ -2.1
VSX2P58304 SEPT2P1-201ENST00000419651 180 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.92□□□□□ -2.1
VSX2P58304 AC003685.2-201ENST00000422795 395 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AC007560.1-201ENST00000426912 237 ntBASIC1.92□□□□□ -2.1
VSX2P58304 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.92□□□□□ -2.1
VSX2P58304 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.92□□□□□ -2.1
VSX2P58304 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.92□□□□□ -2.1
VSX2P58304 USP9YP8-201ENST00000441913 500 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.92□□□□□ -2.1
VSX2P58304 AC092001.1-201ENST00000453012 261 ntBASIC1.92□□□□□ -2.1
VSX2P58304 ANKRD26P4-201ENST00000455755 950 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.92□□□□□ -2.1
VSX2P58304 KLF3P2-201ENST00000465138 268 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.92□□□□□ -2.1
VSX2P58304 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.92□□□□□ -2.1
VSX2P58304 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.92□□□□□ -2.1
VSX2P58304 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.92□□□□□ -2.1
VSX2P58304 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.92□□□□□ -2.1
VSX2P58304 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AL354943.1-201ENST00000572103 781 ntBASIC1.92□□□□□ -2.1
VSX2P58304 MIR4769-201ENST00000584126 77 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AP001981.2-201ENST00000603241 418 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AC027449.1-201ENST00000608890 407 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.15-201ENST00000611544 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.16-201ENST00000613119 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.12-201ENST00000613778 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.20-201ENST00000613956 192 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.9-201ENST00000615427 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.11-201ENST00000616345 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.2-201ENST00000616535 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.3-201ENST00000617785 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.19-201ENST00000618602 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 RNU2-1-201ENST00000618664 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.6-201ENST00000619225 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.5-201ENST00000619465 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AC022960.3-201ENST00000619794 441 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U2.10-201ENST00000620268 191 ntBASIC1.92□□□□□ -2.1
VSX2P58304 AL589994.2-201ENST00000621124 579 ntBASIC1.92□□□□□ -2.1
VSX2P58304 Z99571.1-201ENST00000636677 394 ntBASIC1.92□□□□□ -2.1
VSX2P58304 U6.99-201ENST00000637524 83 ntBASIC1.92□□□□□ -2.1
VSX2P58304 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
VSX2P58304 KPNA2P1-201ENST00000458289 1591 ntBASIC1.92□□□□□ -2.1
VSX2P58304 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VSX2P58304 RNU6-511P-201ENST00000363496 107 ntBASIC1.91□□□□□ -2.1
VSX2P58304 SNORA16B-201ENST00000364674 135 ntBASIC1.91□□□□□ -2.1
VSX2P58304 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
VSX2P58304 RNU6-1083P-201ENST00000384022 107 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.91□□□□□ -2.1
VSX2P58304 ELOCP17-201ENST00000414751 326 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AC092809.3-201ENST00000415453 231 ntBASIC1.91□□□□□ -2.1
VSX2P58304 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.91□□□□□ -2.1
VSX2P58304 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.91□□□□□ -2.1
VSX2P58304 HMGB1P27-201ENST00000431429 603 ntBASIC1.91□□□□□ -2.1
VSX2P58304 MICF-203ENST00000432679 129 ntBASIC1.91□□□□□ -2.1
VSX2P58304 FABP5P14-201ENST00000437273 393 ntBASIC1.91□□□□□ -2.1
VSX2P58304 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.91□□□□□ -2.1
VSX2P58304 AP001324.2-201ENST00000461163 319 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.91□□□□□ -2.1
VSX2P58304 AC068587.2-201ENST00000478386 781 ntBASIC1.91□□□□□ -2.1
VSX2P58304 RPL23AP41-201ENST00000484754 458 ntBASIC1.91□□□□□ -2.1
VSX2P58304 MTND1P3-201ENST00000484956 952 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AC034244.1-201ENST00000507687 207 ntBASIC1.91□□□□□ -2.1
VSX2P58304 TPT1P8-201ENST00000510120 555 ntBASIC1.91□□□□□ -2.1
VSX2P58304 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.91□□□□□ -2.1
VSX2P58304 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.91□□□□□ -2.1
VSX2P58304 SCARNA3-201ENST00000517097 143 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.91□□□□□ -2.1
VSX2P58304 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.91□□□□□ -2.1
VSX2P58304 CBX3P7-201ENST00000532876 502 ntBASIC1.91□□□□□ -2.1
VSX2P58304 CYCSP26-201ENST00000534107 320 ntBASIC1.91□□□□□ -2.1
VSX2P58304 RPS3AP4-201ENST00000555161 764 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
VSX2P58304 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.91□□□□□ -2.1
VSX2P58304 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.91□□□□□ -2.1
VSX2P58304 AC130324.3-201ENST00000614165 542 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AC006338.1-201ENST00000618453 749 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AC098657.3-201ENST00000620434 263 ntBASIC1.91□□□□□ -2.1
VSX2P58304 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.91□□□□□ -2.1
VSX2P58304 AC091953.2-201ENST00000623979 160 ntBASIC1.91□□□□□ -2.1
VSX2P58304 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.91□□□□□ -2.1
VSX2P58304 AC007671.2-201ENST00000637344 619 ntBASIC1.91□□□□□ -2.1
VSX2P58304 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
VSX2P58304 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
VSX2P58304 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms