Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SUMO3P55854 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SUMO3P55854 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SUMO3P55854 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.38□□□□□ -1.87
SUMO3P55854 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SUMO3P55854 ADAM3A-203ENST00000461344 2157 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SUMO3P55854 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.38□□□□□ -1.87
SUMO3P55854 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SUMO3P55854 RNU4-73P-201ENST00000363164 141 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 Y_RNA.474-201ENST00000384341 102 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 SNORD73A-201ENST00000386062 65 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 RNU6-1106P-201ENST00000390845 107 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 AC023141.4-201ENST00000412031 328 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.38□□□□□ -1.87
SUMO3P55854 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.38□□□□□ -1.87
SUMO3P55854 AL365496.1-201ENST00000426885 215 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 AC093151.1-201ENST00000427711 313 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SUMO3P55854 AC125238.1-201ENST00000448842 249 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 RN7SL93P-201ENST00000463035 293 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 RPL23AP14-201ENST00000468281 468 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 MTND5P5-201ENST00000503764 376 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 AC026402.1-201ENST00000513642 170 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 RNU6-277P-201ENST00000516272 106 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SUMO3P55854 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.38□□□□□ -1.87
SUMO3P55854 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.38□□□□□ -1.87
SUMO3P55854 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.38□□□□□ -1.87
SUMO3P55854 AC024153.1-201ENST00000603103 365 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 AC024220.1-201ENST00000603675 484 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 ELOCP5-201ENST00000604924 333 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 HMGB1P50-201ENST00000605814 607 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 RNU1-30P-201ENST00000606575 163 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.38□□□□□ -1.87
SUMO3P55854 MIR8058-201ENST00000615737 89 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 AL355365.1-201ENST00000616480 294 ntBASIC3.38□□□□□ -1.87
SUMO3P55854 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SUMO3P55854 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SUMO3P55854 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SUMO3P55854 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
SUMO3P55854 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.37□□□□□ -1.87
SUMO3P55854 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.37□□□□□ -1.87
SUMO3P55854 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.37□□□□□ -1.87
SUMO3P55854 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SUMO3P55854 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 RNU1-18P-201ENST00000363062 164 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 RNA5SP479-201ENST00000364858 117 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 RNU5E-7P-201ENST00000365290 117 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 MIR548F5-201ENST00000408421 86 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 RN7SKP158-201ENST00000410453 326 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.37□□□□□ -1.87
SUMO3P55854 RPS15AP5-201ENST00000436276 388 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 NIPA2P5-201ENST00000452282 464 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 AC130509.1-201ENST00000464158 433 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SUMO3P55854 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 RPS27P27-201ENST00000498779 255 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.37□□□□□ -1.87
SUMO3P55854 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.37□□□□□ -1.87
SUMO3P55854 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.37□□□□□ -1.87
SUMO3P55854 RN7SKP83-201ENST00000516512 178 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.37□□□□□ -1.87
SUMO3P55854 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 AC113139.1-201ENST00000605049 239 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 AC064836.2-201ENST00000609491 462 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SUMO3P55854 AC244205.2-202ENST00000635781 342 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 U4.7-201ENST00000638126 106 ntBASIC3.37□□□□□ -1.87
SUMO3P55854 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SUMO3P55854 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
SUMO3P55854 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SUMO3P55854 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SUMO3P55854 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 RNU6-942P-201ENST00000363002 107 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 RNU6-1280P-201ENST00000365211 107 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 RNU1-100P-201ENST00000365255 165 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 RNU6-95P-201ENST00000384697 107 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 AL445529.1-201ENST00000398713 389 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.36□□□□□ -1.87
SUMO3P55854 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.36□□□□□ -1.87
SUMO3P55854 FABP5P14-201ENST00000437273 393 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.36□□□□□ -1.87
SUMO3P55854 AC013470.1-201ENST00000453438 462 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 RN7SKP24-201ENST00000515888 284 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 AC022634.1-201ENST00000520765 532 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SUMO3P55854 AC006199.1-201ENST00000548728 219 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms