Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.12□□□□□ -2.07
PKNOX1P55347 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.12□□□□□ -2.07
PKNOX1P55347 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.12□□□□□ -2.07
PKNOX1P55347 MIR3162-201ENST00000581818 82 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 HMGN1P30-201ENST00000589286 268 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PKNOX1P55347 AL359999.1-201ENST00000604513 294 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC026790.2-201ENST00000606282 430 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AP002360.4-201ENST00000606980 481 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 RNU6-87P-201ENST00000607561 108 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC010678.1-201ENST00000614118 713 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC079248.2-201ENST00000623779 326 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 PISRT1-201ENST00000626175 531 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 AC131280.1-202ENST00000624067 4211 ntBASIC2.12□□□□□ -2.07
PKNOX1P55347 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PKNOX1P55347 AL365361.1-201ENST00000566942 3481 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.11□□□□□ -2.07
PKNOX1P55347 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 SNORA75B-201ENST00000384053 137 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 RNU6-39P-201ENST00000384344 107 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 MIR218-1-201ENST00000384999 110 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 SNORA40C-201ENST00000391285 128 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AL355497.1-201ENST00000406262 551 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 USP9YP6-201ENST00000413550 854 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.11□□□□□ -2.07
PKNOX1P55347 PTGES3P4-201ENST00000426243 356 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 RPL30P4-201ENST00000429309 333 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.11□□□□□ -2.07
PKNOX1P55347 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.11□□□□□ -2.07
PKNOX1P55347 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.11□□□□□ -2.07
PKNOX1P55347 AP001324.2-201ENST00000461163 319 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.11□□□□□ -2.07
PKNOX1P55347 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.11□□□□□ -2.07
PKNOX1P55347 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
PKNOX1P55347 RNU6-759P-201ENST00000516740 103 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 SNORA31.19-201ENST00000517079 126 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 SCARNA3-201ENST00000517097 143 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
PKNOX1P55347 AC010186.2-204ENST00000537668 439 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
PKNOX1P55347 LRRC37A5P-203ENST00000580181 585 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.11□□□□□ -2.07
PKNOX1P55347 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AC112191.3-201ENST00000604371 277 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AL021997.1-201ENST00000605757 193 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 MIR15A-201ENST00000607334 83 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AL360219.1-201ENST00000610230 366 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AC009878.1-201ENST00000621819 340 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 AC008993.2-201ENST00000631744 806 ntBASIC2.11□□□□□ -2.07
PKNOX1P55347 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.11□□□□□ -2.07
PKNOX1P55347 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PKNOX1P55347 RNU5E-1-201ENST00000362477 120 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 SNORD56.2-201ENST00000363242 71 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 RNU6-553P-201ENST00000364047 96 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 RNU6-898P-201ENST00000365627 104 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PKNOX1P55347 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PKNOX1P55347 RNU6-190P-201ENST00000384154 102 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 RNU6-301P-201ENST00000384277 107 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 Y_RNA.560-201ENST00000384689 102 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 RNU6-19P-201ENST00000384718 107 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 MIR518D-201ENST00000385014 87 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 MIR301A-201ENST00000385261 86 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PKNOX1P55347 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.1□□□□□ -2.07
PKNOX1P55347 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.1□□□□□ -2.07
PKNOX1P55347 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.1□□□□□ -2.07
PKNOX1P55347 AL589872.1-201ENST00000426602 288 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PKNOX1P55347 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 KATNBL1P6-201ENST00000453433 915 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.1□□□□□ -2.07
PKNOX1P55347 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.1□□□□□ -2.07
PKNOX1P55347 RPS3AP22-201ENST00000488297 769 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 FAM92A1P2-202ENST00000504766 877 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.1□□□□□ -2.07
PKNOX1P55347 MRPS33P3-201ENST00000513456 322 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 RNU7-51P-201ENST00000516560 62 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 SCARNA16.3-201ENST00000516595 184 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 RNU6-232P-201ENST00000517144 64 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 AL157871.3-201ENST00000557231 293 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.1□□□□□ -2.07
PKNOX1P55347 MIR4782-201ENST00000577987 79 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 MIR5571-201ENST00000577998 113 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PKNOX1P55347 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.1□□□□□ -2.07
PKNOX1P55347 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.1□□□□□ -2.07
PKNOX1P55347 AC174048.1-201ENST00000603389 144 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 uc_338.14-201ENST00000613162 166 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 AC009159.2-201ENST00000617603 606 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 AC243829.7-201ENST00000633081 225 ntBASIC2.1□□□□□ -2.07
PKNOX1P55347 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PKNOX1P55347 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.09□□□□□ -2.07
PKNOX1P55347 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PKNOX1P55347 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms