Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIM2P55344 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.23□□□□□ -2.05
LIM2P55344 ADAM3A-203ENST00000461344 2157 ntBASIC2.22□□□□□ -2.05
LIM2P55344 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.22□□□□□ -2.05
LIM2P55344 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
LIM2P55344 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
LIM2P55344 RNA5SP289-201ENST00000362332 137 ntBASIC2.22□□□□□ -2.05
LIM2P55344 Y_RNA.33-201ENST00000362591 102 ntBASIC2.22□□□□□ -2.05
LIM2P55344 U3.4-201ENST00000363352 213 ntBASIC2.22□□□□□ -2.05
LIM2P55344 SET-203ENST00000372688 801 ntTSL 2 BASIC2.22□□□□□ -2.05
LIM2P55344 RNU6-39P-201ENST00000384344 107 ntBASIC2.22□□□□□ -2.05
LIM2P55344 RNU6-658P-201ENST00000384606 106 ntBASIC2.22□□□□□ -2.05
LIM2P55344 SNORA40C-201ENST00000391285 128 ntBASIC2.22□□□□□ -2.05
LIM2P55344 U3.37-201ENST00000408528 213 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC127391.1-201ENST00000411737 98 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AL096701.2-201ENST00000416920 238 ntBASIC2.22□□□□□ -2.05
LIM2P55344 MTND3P17-201ENST00000416968 344 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC007283.2-201ENST00000424739 197 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC092427.1-202ENST00000430569 476 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.22□□□□□ -2.05
LIM2P55344 AL353706.1-201ENST00000436728 494 ntBASIC2.22□□□□□ -2.05
LIM2P55344 RPS15AP7-201ENST00000439294 405 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC009961.3-201ENST00000449832 765 ntBASIC2.22□□□□□ -2.05
LIM2P55344 GAPDHP17-201ENST00000449858 1001 ntBASIC2.22□□□□□ -2.05
LIM2P55344 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.22□□□□□ -2.05
LIM2P55344 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.22□□□□□ -2.05
LIM2P55344 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.22□□□□□ -2.05
LIM2P55344 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.22□□□□□ -2.05
LIM2P55344 AC009902.1-201ENST00000519351 183 ntBASIC2.22□□□□□ -2.05
LIM2P55344 MTND2P38-201ENST00000522536 667 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.22□□□□□ -2.05
LIM2P55344 OR5B19P-201ENST00000531766 928 ntBASIC2.22□□□□□ -2.05
LIM2P55344 MTND3P12-201ENST00000559068 328 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.22□□□□□ -2.05
LIM2P55344 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.22□□□□□ -2.05
LIM2P55344 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.22□□□□□ -2.05
LIM2P55344 MIR4782-201ENST00000577987 79 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
LIM2P55344 MIR3167-201ENST00000579623 85 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC024619.4-201ENST00000580924 316 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC245014.2-201ENST00000603689 287 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC090578.1-201ENST00000604955 591 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AC246785.4-201ENST00000605374 287 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AL133173.2-201ENST00000614270 90 ntBASIC2.22□□□□□ -2.05
LIM2P55344 AP001486.3-201ENST00000615334 372 ntBASIC2.22□□□□□ -2.05
LIM2P55344 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
LIM2P55344 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.22□□□□□ -2.05
LIM2P55344 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LIM2P55344 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.05
LIM2P55344 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LIM2P55344 MTND5P17-201ENST00000418405 1603 ntBASIC2.21□□□□□ -2.06
LIM2P55344 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LIM2P55344 MIR449A-201ENST00000362113 91 ntBASIC2.21□□□□□ -2.06
LIM2P55344 RNU4-82P-201ENST00000362443 140 ntBASIC2.21□□□□□ -2.06
LIM2P55344 Y_RNA.22-201ENST00000362492 102 ntBASIC2.21□□□□□ -2.06
LIM2P55344 RNU6-1097P-201ENST00000363586 107 ntBASIC2.21□□□□□ -2.06
LIM2P55344 RNU6-169P-201ENST00000365336 107 ntBASIC2.21□□□□□ -2.06
LIM2P55344 RNU6-108P-201ENST00000365558 107 ntBASIC2.21□□□□□ -2.06
LIM2P55344 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LIM2P55344 Y_RNA.500-201ENST00000384466 111 ntBASIC2.21□□□□□ -2.06
LIM2P55344 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LIM2P55344 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LIM2P55344 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.21□□□□□ -2.06
LIM2P55344 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.21□□□□□ -2.06
LIM2P55344 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.21□□□□□ -2.06
LIM2P55344 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.21□□□□□ -2.06
LIM2P55344 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.21□□□□□ -2.06
LIM2P55344 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.21□□□□□ -2.06
LIM2P55344 CALM2P2-201ENST00000428512 440 ntBASIC2.21□□□□□ -2.06
LIM2P55344 MYL8P-204ENST00000431574 518 ntBASIC2.21□□□□□ -2.06
LIM2P55344 AC104850.1-201ENST00000435940 476 ntBASIC2.21□□□□□ -2.06
LIM2P55344 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.21□□□□□ -2.06
LIM2P55344 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.21□□□□□ -2.06
LIM2P55344 AC139453.3-201ENST00000493276 369 ntBASIC2.21□□□□□ -2.06
LIM2P55344 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.21□□□□□ -2.06
LIM2P55344 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.21□□□□□ -2.06
LIM2P55344 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.21□□□□□ -2.06
LIM2P55344 RNU6-410P-201ENST00000517006 107 ntBASIC2.21□□□□□ -2.06
LIM2P55344 SNORA31.18-201ENST00000517043 134 ntBASIC2.21□□□□□ -2.06
LIM2P55344 AC090572.1-201ENST00000519251 160 ntBASIC2.21□□□□□ -2.06
LIM2P55344 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.21□□□□□ -2.06
LIM2P55344 AP002453.2-201ENST00000533503 320 ntBASIC2.21□□□□□ -2.06
LIM2P55344 ADI1P3-201ENST00000549509 470 ntBASIC2.21□□□□□ -2.06
LIM2P55344 AC103810.1-201ENST00000579873 453 ntBASIC2.21□□□□□ -2.06
LIM2P55344 OR1M4P-201ENST00000589199 287 ntBASIC2.21□□□□□ -2.06
LIM2P55344 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.21□□□□□ -2.06
LIM2P55344 AC087752.4-201ENST00000605911 462 ntBASIC2.21□□□□□ -2.06
LIM2P55344 MIR15A-201ENST00000607334 83 ntBASIC2.21□□□□□ -2.06
LIM2P55344 AC012409.4-201ENST00000612923 249 ntBASIC2.21□□□□□ -2.06
LIM2P55344 uc_338.14-201ENST00000613162 166 ntBASIC2.21□□□□□ -2.06
LIM2P55344 AC130324.3-201ENST00000614165 542 ntBASIC2.21□□□□□ -2.06
LIM2P55344 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LIM2P55344 IGHVIII-44-202ENST00000636235 289 ntBASIC2.21□□□□□ -2.06
LIM2P55344 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.21□□□□□ -2.06
LIM2P55344 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.21□□□□□ -2.06
LIM2P55344 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LIM2P55344 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LIM2P55344 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LIM2P55344 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.21□□□□□ -2.06
LIM2P55344 MTND5P30-201ENST00000452896 1731 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms