Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.55□□□□□ -2
HMGCS2P54868 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.55□□□□□ -2
HMGCS2P54868 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.55□□□□□ -2
HMGCS2P54868 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.55□□□□□ -2
HMGCS2P54868 RNU6-991P-201ENST00000516168 107 ntBASIC2.55□□□□□ -2
HMGCS2P54868 RNU6-1256P-201ENST00000516539 103 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.55□□□□□ -2
HMGCS2P54868 AC093012.1-202ENST00000549403 582 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.55□□□□□ -2
HMGCS2P54868 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.55□□□□□ -2
HMGCS2P54868 AGGF1P4-201ENST00000568249 801 ntBASIC2.55□□□□□ -2
HMGCS2P54868 MTCO3P13-201ENST00000577757 781 ntBASIC2.55□□□□□ -2
HMGCS2P54868 MTND1P15-201ENST00000579262 949 ntBASIC2.55□□□□□ -2
HMGCS2P54868 MIR3682-201ENST00000581338 84 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AC087683.1-201ENST00000591187 441 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AL161729.4-201ENST00000604650 476 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AL589743.7-201ENST00000612637 233 ntBASIC2.55□□□□□ -2
HMGCS2P54868 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.55□□□□□ -2
HMGCS2P54868 AC010378.1-201ENST00000619270 362 ntBASIC2.55□□□□□ -2
HMGCS2P54868 CR848007.1-201ENST00000442354 1699 ntBASIC2.54□□□□□ -2
HMGCS2P54868 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGCS2P54868 RNU6-39P-201ENST00000384344 107 ntBASIC2.54□□□□□ -2
HMGCS2P54868 SNORD116-4-201ENST00000384733 96 ntBASIC2.54□□□□□ -2
HMGCS2P54868 MIR767-201ENST00000390228 109 ntBASIC2.54□□□□□ -2
HMGCS2P54868 FO393413.1-201ENST00000402892 195 ntBASIC2.54□□□□□ -2
HMGCS2P54868 RNU6-193P-201ENST00000410977 107 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AL663109.1-201ENST00000411498 844 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AC127391.1-201ENST00000411737 98 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AL513331.1-201ENST00000411908 397 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.54□□□□□ -2
HMGCS2P54868 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.54□□□□□ -2
HMGCS2P54868 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGCS2P54868 AL603825.1-201ENST00000438481 80 ntBASIC2.54□□□□□ -2
HMGCS2P54868 MTCO2P7-201ENST00000446518 666 ntBASIC2.54□□□□□ -2
HMGCS2P54868 MTCYBP1-201ENST00000454315 1119 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.54□□□□□ -2
HMGCS2P54868 SNORA31.3-201ENST00000516029 96 ntBASIC2.54□□□□□ -2
HMGCS2P54868 RNU6-390P-201ENST00000516259 103 ntBASIC2.54□□□□□ -2
HMGCS2P54868 RNU6-430P-201ENST00000517078 107 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AP006587.4-201ENST00000526053 529 ntBASIC2.54□□□□□ -2
HMGCS2P54868 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGCS2P54868 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.54□□□□□ -2
HMGCS2P54868 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.54□□□□□ -2
HMGCS2P54868 AC124947.2-202ENST00000552735 133 ntBASIC2.54□□□□□ -2
HMGCS2P54868 DPPA3P3-201ENST00000603842 430 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AL136363.1-201ENST00000605349 337 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AL627309.6-201ENST00000606857 840 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AC109347.2-201ENST00000610220 349 ntBASIC2.54□□□□□ -2
HMGCS2P54868 Z99129.1-201ENST00000612510 255 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AC008498.1-201ENST00000613012 531 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AL133173.2-201ENST00000614270 90 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AC099842.1-201ENST00000619919 596 ntBASIC2.54□□□□□ -2
HMGCS2P54868 AL160394.1-201ENST00000624765 724 ntBASIC2.54□□□□□ -2
HMGCS2P54868 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.54□□□□□ -2
HMGCS2P54868 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMGCS2P54868 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMGCS2P54868 SNORD56.2-201ENST00000363242 71 ntBASIC2.53□□□□□ -2
HMGCS2P54868 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGCS2P54868 Y_RNA.559-201ENST00000384686 107 ntBASIC2.53□□□□□ -2
HMGCS2P54868 RNA5SP492-201ENST00000411330 114 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.53□□□□□ -2
HMGCS2P54868 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS2P54868 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.53□□□□□ -2
HMGCS2P54868 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS2P54868 AC093106.2-201ENST00000428212 385 ntBASIC2.53□□□□□ -2
HMGCS2P54868 RPL31P35-201ENST00000431058 377 ntBASIC2.53□□□□□ -2
HMGCS2P54868 MTCO3P5-201ENST00000433620 714 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AC119618.1-201ENST00000434191 222 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AC073614.1-201ENST00000438690 650 ntBASIC2.53□□□□□ -2
HMGCS2P54868 CBWD4P-201ENST00000445695 655 ntBASIC2.53□□□□□ -2
HMGCS2P54868 MTND2P24-201ENST00000453434 806 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.53□□□□□ -2
HMGCS2P54868 HMGN2P23-201ENST00000456759 269 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS2P54868 AL135752.1-201ENST00000479477 471 ntBASIC2.53□□□□□ -2
HMGCS2P54868 MTND2P33-201ENST00000506452 1031 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS2P54868 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
HMGCS2P54868 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
HMGCS2P54868 RNU6-405P-201ENST00000516637 110 ntBASIC2.53□□□□□ -2
HMGCS2P54868 Vault.3-201ENST00000516676 95 ntBASIC2.53□□□□□ -2
HMGCS2P54868 RN7SKP258-201ENST00000517151 304 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AC090572.1-201ENST00000519251 160 ntBASIC2.53□□□□□ -2
HMGCS2P54868 HSPE1P20-201ENST00000538133 289 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.53□□□□□ -2
HMGCS2P54868 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.53□□□□□ -2
HMGCS2P54868 AMZ2P1-203ENST00000565833 850 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.53□□□□□ -2
HMGCS2P54868 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.53□□□□□ -2
HMGCS2P54868 AC091834.1-201ENST00000614543 472 ntBASIC2.53□□□□□ -2
HMGCS2P54868 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.53□□□□□ -2
HMGCS2P54868 AC009831.4-201ENST00000620744 325 ntBASIC2.53□□□□□ -2
HMGCS2P54868 MIR6132-201ENST00000622083 109 ntBASIC2.53□□□□□ -2
HMGCS2P54868 MTND5P29-201ENST00000458676 1807 ntBASIC2.53□□□□□ -2
HMGCS2P54868 AP006437.1-201ENST00000641440 3685 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGCS2P54868 Y_RNA.22-201ENST00000362492 102 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU6-1180P-201ENST00000364935 107 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 RNU6-282P-201ENST00000365357 103 ntBASIC2.52□□□□□ -2.01
HMGCS2P54868 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms