Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AP003122.4-201ENST00000530980 758 ntBASIC0.96□□□□□ -2.26
GTF2A1P52655 PSMA3P-201ENST00000555485 635 ntBASIC0.96□□□□□ -2.26
GTF2A1P52655 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.96□□□□□ -2.26
GTF2A1P52655 BBIP1P1-201ENST00000602999 279 ntBASIC0.96□□□□□ -2.26
GTF2A1P52655 AC013244.2-201ENST00000603396 103 ntBASIC0.96□□□□□ -2.26
GTF2A1P52655 MIR1264-201ENST00000616374 69 ntBASIC0.96□□□□□ -2.26
GTF2A1P52655 AC241585.2-209ENST00000638217 143 ntBASIC0.96□□□□□ -2.26
GTF2A1P52655 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
GTF2A1P52655 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.96□□□□□ -2.26
GTF2A1P52655 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
GTF2A1P52655 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.95□□□□□ -2.26
GTF2A1P52655 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
GTF2A1P52655 RPL22P22-201ENST00000395439 379 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 AL133264.1-201ENST00000407157 562 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.95□□□□□ -2.26
GTF2A1P52655 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.95□□□□□ -2.26
GTF2A1P52655 snoU13.26-201ENST00000459452 105 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 AC091917.2-201ENST00000505002 744 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 MTCYBP16-201ENST00000509187 1129 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 AC117532.1-201ENST00000514638 323 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.95□□□□□ -2.26
GTF2A1P52655 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.95□□□□□ -2.26
GTF2A1P52655 AC233266.2-201ENST00000567067 528 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 uc_338.12-201ENST00000616344 181 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 AL596245.1-201ENST00000618994 362 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 AL121890.5-201ENST00000620848 304 ntBASIC0.95□□□□□ -2.26
GTF2A1P52655 AL138713.1-201ENST00000624026 2130 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 SNORD65C-201ENST00000390962 71 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 RPL17P50-201ENST00000396131 546 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 RNU4-62P-201ENST00000410125 130 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 LUZP4P1-201ENST00000415420 344 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.94□□□□□ -2.26
GTF2A1P52655 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.94□□□□□ -2.26
GTF2A1P52655 MTCO3P1-205ENST00000422088 832 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.94□□□□□ -2.26
GTF2A1P52655 AC245102.2-201ENST00000448956 180 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.94□□□□□ -2.26
GTF2A1P52655 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.94□□□□□ -2.26
GTF2A1P52655 RNU6-581P-201ENST00000516214 105 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.94□□□□□ -2.26
GTF2A1P52655 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.94□□□□□ -2.26
GTF2A1P52655 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.94□□□□□ -2.26
GTF2A1P52655 AC079598.5-201ENST00000547460 117 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AC136932.1-201ENST00000574771 208 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AL158827.2-201ENST00000602494 330 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AL022345.1-201ENST00000607292 135 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AC079416.3-201ENST00000624479 549 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AL691447.3-201ENST00000635020 330 ntBASIC0.94□□□□□ -2.26
GTF2A1P52655 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
GTF2A1P52655 SNORA7.1-201ENST00000363750 139 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 RNU6-658P-201ENST00000384606 106 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 RNA5SP100-201ENST00000410903 110 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 RNA5SP59-201ENST00000410922 110 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 AC127391.1-201ENST00000411737 98 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 AL353621.1-201ENST00000418219 243 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 BTF3L4P3-201ENST00000418879 476 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.93□□□□□ -2.26
GTF2A1P52655 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.93□□□□□ -2.26
GTF2A1P52655 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.93□□□□□ -2.26
GTF2A1P52655 DUXAP8-207ENST00000456786 622 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.93□□□□□ -2.26
GTF2A1P52655 AC108729.1-201ENST00000487812 947 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.93□□□□□ -2.26
GTF2A1P52655 AC025465.3-201ENST00000510570 311 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.93□□□□□ -2.26
GTF2A1P52655 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.93□□□□□ -2.26
GTF2A1P52655 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.93□□□□□ -2.26
GTF2A1P52655 RAB11AP2-201ENST00000545905 639 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 AC073544.2-201ENST00000601155 540 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 AL512598.1-201ENST00000610158 273 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 AC091965.5-201ENST00000624785 342 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 AC132825.7-201ENST00000638744 335 ntBASIC0.93□□□□□ -2.26
GTF2A1P52655 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
GTF2A1P52655 Y_RNA.245-201ENST00000364493 95 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 SNORA29-201ENST00000384183 140 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 ELOCP14-201ENST00000428070 331 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 ELOCP7-201ENST00000439968 331 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 RPS4XP11-201ENST00000446897 772 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 AC092001.1-201ENST00000453012 261 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.92□□□□□ -2.26
GTF2A1P52655 BX322784.1-201ENST00000455793 1077 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 RNU7-95P-201ENST00000459222 64 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 MEMO1P3-201ENST00000459811 302 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 AC026410.2-201ENST00000460281 156 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.92□□□□□ -2.26
GTF2A1P52655 RPS26P55-201ENST00000471178 356 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 RPL30P12-201ENST00000474666 353 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.92□□□□□ -2.26
GTF2A1P52655 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.92□□□□□ -2.26
GTF2A1P52655 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.92□□□□□ -2.26
GTF2A1P52655 AC104229.1-201ENST00000561364 255 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 AP001542.2-201ENST00000593141 364 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 BNIP3P27-201ENST00000599991 412 ntBASIC0.92□□□□□ -2.26
GTF2A1P52655 AC011451.2-201ENST00000604303 598 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms