Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNA5SP471-201ENST00000516971 106 ntBASIC3.15□□□□□ -1.91
CLCN3P51790 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.15□□□□□ -1.91
CLCN3P51790 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.15□□□□□ -1.91
CLCN3P51790 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.15□□□□□ -1.91
CLCN3P51790 AC138761.3-201ENST00000579993 334 ntBASIC3.15□□□□□ -1.91
CLCN3P51790 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.15□□□□□ -1.91
CLCN3P51790 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.15□□□□□ -1.91
CLCN3P51790 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.15□□□□□ -1.91
CLCN3P51790 MTND5P27-201ENST00000428871 1720 ntBASIC3.15□□□□□ -1.91
CLCN3P51790 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
CLCN3P51790 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN3P51790 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN3P51790 AC006020.1-201ENST00000420179 1854 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN3P51790 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CLCN3P51790 Y_RNA.381-201ENST00000365666 102 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 SNORA69-201ENST00000383895 132 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 RNU6-140P-201ENST00000384566 108 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN3P51790 AL354719.1-201ENST00000406535 843 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 RNU2-41P-201ENST00000410991 178 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCN3P51790 OR51A5P-201ENST00000415429 942 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC114491.1-201ENST00000416095 246 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 BTF3L4P3-201ENST00000418879 476 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCN3P51790 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.14□□□□□ -1.91
CLCN3P51790 CALM2P2-201ENST00000428512 440 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AL591704.1-201ENST00000432574 275 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AL591212.2-201ENST00000433923 257 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.14□□□□□ -1.91
CLCN3P51790 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCN3P51790 MTND4P25-201ENST00000441039 533 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 MTND3P10-201ENST00000450967 341 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC108938.1-201ENST00000451204 136 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCN3P51790 RPL7P5-201ENST00000471472 736 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 MTCO2P30-201ENST00000503662 364 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCN3P51790 RNA5SP380-201ENST00000517190 98 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCN3P51790 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.14□□□□□ -1.91
CLCN3P51790 AF235103.2-201ENST00000525753 346 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.14□□□□□ -1.91
CLCN3P51790 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCN3P51790 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN3P51790 BNIP3P9-201ENST00000603714 553 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 Z84480.1-201ENST00000605131 311 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC022893.3-201ENST00000607665 437 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 FTX_3.1-201ENST00000610451 147 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC012409.4-201ENST00000612923 249 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AC025034.2-201ENST00000623264 286 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.14□□□□□ -1.91
CLCN3P51790 AC024614.3-201ENST00000637860 256 ntBASIC3.14□□□□□ -1.91
CLCN3P51790 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN3P51790 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
CLCN3P51790 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLCN3P51790 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCN3P51790 AP003122.5-201ENST00000527668 3766 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCN3P51790 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CLCN3P51790 AC233263.6-201ENST00000631132 1963 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLCN3P51790 Y_RNA.279-201ENST00000364763 95 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 RNU6-877P-201ENST00000383868 107 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 Y_RNA.534-201ENST00000384599 112 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 UBE2V1P2-201ENST00000397758 440 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AL031121.1-201ENST00000406553 254 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 RAP1BP3-201ENST00000407180 549 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 SNORA11.2-201ENST00000408318 127 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 SDCBPP3-201ENST00000419629 891 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 GPM6BP2-201ENST00000432046 144 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLCN3P51790 GPM6BP1-201ENST00000446387 144 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AC233702.1-201ENST00000482905 502 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCN3P51790 AC098591.2-201ENST00000510152 315 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AC114781.4-201ENST00000513707 639 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 Y_RNA.702-201ENST00000516843 96 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 RNU6-143P-201ENST00000516942 93 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.13□□□□□ -1.91
CLCN3P51790 AP005435.4-201ENST00000529514 284 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 ADI1P3-201ENST00000549509 470 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AL163153.1-201ENST00000554223 283 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AL138976.2-201ENST00000563989 694 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 MIR4775-201ENST00000581168 75 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 RPL12P50-201ENST00000603116 116 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AC006504.8-201ENST00000621046 635 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 MIR3662-201ENST00000637030 95 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.13□□□□□ -1.91
CLCN3P51790 API5P2-201ENST00000397055 1498 ntBASIC3.13□□□□□ -1.91
CLCN3P51790 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLCN3P51790 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CLCN3P51790 AC010680.1-201ENST00000590024 3590 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLCN3P51790 FTLP6-201ENST00000355274 422 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 RNU6-288P-201ENST00000363690 104 ntBASIC3.12□□□□□ -1.91
CLCN3P51790 RNU6-270P-201ENST00000364131 105 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms