Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MTND5P27-201ENST00000428871 1720 ntBASIC4.18□□□□□ -1.74
MRE11P49959 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
MRE11P49959 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.18□□□□□ -1.74
MRE11P49959 RNU6-701P-201ENST00000384059 107 ntBASIC4.18□□□□□ -1.74
MRE11P49959 Y_RNA.482-201ENST00000384377 111 ntBASIC4.18□□□□□ -1.74
MRE11P49959 RNU6-837P-201ENST00000391056 108 ntBASIC4.18□□□□□ -1.74
MRE11P49959 AL360182.1-201ENST00000397433 468 ntBASIC4.18□□□□□ -1.74
MRE11P49959 MTHFD2P2-201ENST00000407725 247 ntBASIC4.18□□□□□ -1.74
MRE11P49959 RNU4-78P-201ENST00000410940 126 ntBASIC4.18□□□□□ -1.74
MRE11P49959 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.18□□□□□ -1.74
MRE11P49959 MTCO3P10-201ENST00000455912 772 ntBASIC4.18□□□□□ -1.74
MRE11P49959 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.18□□□□□ -1.74
MRE11P49959 AC084357.1-201ENST00000473404 255 ntBASIC4.18□□□□□ -1.74
MRE11P49959 SMURF2P1-201ENST00000514992 481 ntBASIC4.18□□□□□ -1.74
MRE11P49959 RNU6-123P-201ENST00000516163 102 ntBASIC4.18□□□□□ -1.74
MRE11P49959 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.18□□□□□ -1.74
MRE11P49959 CYCSP30-201ENST00000546447 172 ntBASIC4.18□□□□□ -1.74
MRE11P49959 AC090115.3-201ENST00000553218 849 ntBASIC4.18□□□□□ -1.74
MRE11P49959 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.18□□□□□ -1.74
MRE11P49959 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.18□□□□□ -1.74
MRE11P49959 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.18□□□□□ -1.74
MRE11P49959 AL138889.2-201ENST00000603883 242 ntBASIC4.18□□□□□ -1.74
MRE11P49959 AL670379.4-201ENST00000605279 254 ntBASIC4.18□□□□□ -1.74
MRE11P49959 AC013412.1-201ENST00000610687 192 ntBASIC4.18□□□□□ -1.74
MRE11P49959 AL138726.1-201ENST00000614873 333 ntBASIC4.18□□□□□ -1.74
MRE11P49959 FAM157A-202ENST00000615155 405 ntBASIC4.18□□□□□ -1.74
MRE11P49959 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.18□□□□□ -1.74
MRE11P49959 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MRE11P49959 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.18□□□□□ -1.74
MRE11P49959 ZNF519P1-201ENST00000449011 1626 ntBASIC4.17□□□□□ -1.74
MRE11P49959 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
MRE11P49959 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
MRE11P49959 Y_RNA.28-201ENST00000362554 111 ntBASIC4.17□□□□□ -1.74
MRE11P49959 RNA5SP383-201ENST00000362934 120 ntBASIC4.17□□□□□ -1.74
MRE11P49959 Y_RNA.112-201ENST00000363250 102 ntBASIC4.17□□□□□ -1.74
MRE11P49959 RNA5SP424-201ENST00000390988 115 ntBASIC4.17□□□□□ -1.74
MRE11P49959 SNORD70.1-201ENST00000391007 85 ntBASIC4.17□□□□□ -1.74
MRE11P49959 SNORA48.5-201ENST00000391143 135 ntBASIC4.17□□□□□ -1.74
MRE11P49959 MIR450B-201ENST00000401182 78 ntBASIC4.17□□□□□ -1.74
MRE11P49959 NDUFS5P1-201ENST00000405668 289 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.17□□□□□ -1.74
MRE11P49959 RPL7P10-201ENST00000417407 739 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.17□□□□□ -1.74
MRE11P49959 AL137014.1-201ENST00000420490 1226 ntBASIC4.17□□□□□ -1.74
MRE11P49959 FABP5P13-201ENST00000452144 328 ntBASIC4.17□□□□□ -1.74
MRE11P49959 RPL30P15-201ENST00000457129 321 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.17□□□□□ -1.74
MRE11P49959 AC025518.1-201ENST00000479856 347 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.17□□□□□ -1.74
MRE11P49959 AC021146.2-201ENST00000504736 556 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC008526.1-201ENST00000509149 338 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC104619.4-201ENST00000510773 249 ntBASIC4.17□□□□□ -1.74
MRE11P49959 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.17□□□□□ -1.74
MRE11P49959 RNU6-237P-201ENST00000515985 71 ntBASIC4.17□□□□□ -1.74
MRE11P49959 RNU6-1095P-201ENST00000516148 108 ntBASIC4.17□□□□□ -1.74
MRE11P49959 SNORA64.4-201ENST00000516632 81 ntBASIC4.17□□□□□ -1.74
MRE11P49959 MIR2276-201ENST00000516886 89 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.17□□□□□ -1.74
MRE11P49959 AC104027.1-201ENST00000521887 300 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC093012.1-202ENST00000549403 582 ntBASIC4.17□□□□□ -1.74
MRE11P49959 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.17□□□□□ -1.74
MRE11P49959 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.17□□□□□ -1.74
MRE11P49959 MIR3945-201ENST00000581853 98 ntBASIC4.17□□□□□ -1.74
MRE11P49959 XIAPP1-201ENST00000603162 600 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC106900.2-201ENST00000604994 317 ntBASIC4.17□□□□□ -1.74
MRE11P49959 ATP1B3P1-201ENST00000605365 821 ntBASIC4.17□□□□□ -1.74
MRE11P49959 SNORA62.6-201ENST00000606322 83 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.17□□□□□ -1.74
MRE11P49959 AC107294.3-201ENST00000609211 526 ntBASIC4.17□□□□□ -1.74
MRE11P49959 AC098657.3-201ENST00000620434 263 ntBASIC4.17□□□□□ -1.74
MRE11P49959 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.17□□□□□ -1.74
MRE11P49959 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MRE11P49959 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
MRE11P49959 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MRE11P49959 MTND5P19-201ENST00000424872 1794 ntBASIC4.17□□□□□ -1.74
MRE11P49959 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MRE11P49959 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 RNU6-1155P-201ENST00000363554 107 ntBASIC4.16□□□□□ -1.74
MRE11P49959 RNU6-335P-201ENST00000364563 113 ntBASIC4.16□□□□□ -1.74
MRE11P49959 Y_RNA.399-201ENST00000383955 105 ntBASIC4.16□□□□□ -1.74
MRE11P49959 RNU6-601P-201ENST00000384540 107 ntBASIC4.16□□□□□ -1.74
MRE11P49959 SNORA16.2-201ENST00000390991 127 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AL583834.1-201ENST00000406943 343 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AC113618.1-201ENST00000416747 285 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AC099677.1-201ENST00000420575 175 ntBASIC4.16□□□□□ -1.74
MRE11P49959 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MRE11P49959 HMGN1P18-201ENST00000457642 277 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AC106707.2-201ENST00000484182 374 ntBASIC4.16□□□□□ -1.74
MRE11P49959 RN7SL323P-201ENST00000494712 295 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AC079140.5-201ENST00000507882 310 ntBASIC4.16□□□□□ -1.74
MRE11P49959 HMGN1P11-201ENST00000508668 303 ntBASIC4.16□□□□□ -1.74
MRE11P49959 RNA5SP380-201ENST00000517190 98 ntBASIC4.16□□□□□ -1.74
MRE11P49959 RNU6-988P-201ENST00000519081 107 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.16□□□□□ -1.74
MRE11P49959 EIF4BP1-201ENST00000554881 351 ntBASIC4.16□□□□□ -1.74
MRE11P49959 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.16□□□□□ -1.74
MRE11P49959 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.16□□□□□ -1.74
MRE11P49959 SNRPGP15-201ENST00000600149 222 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms